Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 AL390961.4-201ENST00000623958 2535 ntBASIC15.72■□□□□ 0.11
FREM1Q5H8C1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 AC125634.1-201ENST00000438758 1403 ntBASIC15.72■□□□□ 0.11
FREM1Q5H8C1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.72■□□□□ 0.11
FREM1Q5H8C1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 AC008608.2-201ENST00000606089 416 ntBASIC15.71■□□□□ 0.11
FREM1Q5H8C1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
FREM1Q5H8C1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
FREM1Q5H8C1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.71■□□□□ 0.1
FREM1Q5H8C1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 POM121L3P-201ENST00000419331 1163 ntBASIC15.7■□□□□ 0.1
FREM1Q5H8C1 AC007967.3-201ENST00000434308 558 ntBASIC15.7■□□□□ 0.1
FREM1Q5H8C1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 AC004870.1-201ENST00000315132 882 ntBASIC15.7■□□□□ 0.1
FREM1Q5H8C1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 AC009078.2-202ENST00000463353 338 ntBASIC15.7■□□□□ 0.1
FREM1Q5H8C1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 AP002469.2-201ENST00000531724 424 ntBASIC15.7■□□□□ 0.1
FREM1Q5H8C1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
FREM1Q5H8C1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 TP73-AS1-210ENST00000637775 1455 ntBASIC15.69■□□□□ 0.1
FREM1Q5H8C1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.69■□□□□ 0.1
FREM1Q5H8C1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms