Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 HLA-J-201ENST00000462773 1622 ntBASIC21.38■■□□□ 1.01
PDS5AQ29RF7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 AC145285.3-201ENST00000564603 959 ntBASIC21.38■■□□□ 1.01
PDS5AQ29RF7 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 AC116407.3-201ENST00000623905 1129 ntBASIC21.38■■□□□ 1.01
PDS5AQ29RF7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 SIRPAP1-201ENST00000448467 1770 ntBASIC21.37■■□□□ 1.01
PDS5AQ29RF7 AC003669.1-201ENST00000334569 611 ntBASIC21.37■■□□□ 1.01
PDS5AQ29RF7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 KRT18P27-201ENST00000427733 1299 ntBASIC21.37■■□□□ 1.01
PDS5AQ29RF7 PMS2P1-201ENST00000431037 1228 ntBASIC21.37■■□□□ 1.01
PDS5AQ29RF7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 AC002558.1-201ENST00000488906 803 ntBASIC21.37■■□□□ 1.01
PDS5AQ29RF7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 AC012640.2-201ENST00000561606 901 ntBASIC21.37■■□□□ 1.01
PDS5AQ29RF7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 AP000997.3-201ENST00000623333 2250 ntBASIC21.37■■□□□ 1.01
PDS5AQ29RF7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.37■■□□□ 1.01
PDS5AQ29RF7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 AL020989.1-201ENST00000422979 469 ntBASIC21.36■■□□□ 1.01
PDS5AQ29RF7 AC005104.2-201ENST00000427818 678 ntBASIC21.36■■□□□ 1.01
PDS5AQ29RF7 BX005266.1-201ENST00000473402 457 ntBASIC21.36■■□□□ 1.01
PDS5AQ29RF7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 AC106730.1-201ENST00000566722 1090 ntBASIC21.36■■□□□ 1.01
PDS5AQ29RF7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.36■■□□□ 1.01
PDS5AQ29RF7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PDS5AQ29RF7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDS5AQ29RF7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms