Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.14■□□□□ 0.01
COL10A1Q03692 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
COL10A1Q03692 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
COL10A1Q03692 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
COL10A1Q03692 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
COL10A1Q03692 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.14■□□□□ 0.01
COL10A1Q03692 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.14■□□□□ 0.01
COL10A1Q03692 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
COL10A1Q03692 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL10A1Q03692 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
COL10A1Q03692 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL10A1Q03692 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL10A1Q03692 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL10A1Q03692 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL10A1Q03692 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL10A1Q03692 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
COL10A1Q03692 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.13■□□□□ 0.01
COL10A1Q03692 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL10A1Q03692 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL10A1Q03692 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.13■□□□□ 0.01
COL10A1Q03692 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL10A1Q03692 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL10A1Q03692 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL10A1Q03692 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.13■□□□□ 0.01
COL10A1Q03692 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL10A1Q03692 KRT18P48-201ENST00000434763 852 ntBASIC15.13■□□□□ 0.01
COL10A1Q03692 SLC25A6P5-201ENST00000435663 894 ntBASIC15.13■□□□□ 0.01
COL10A1Q03692 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.13■□□□□ 0.01
COL10A1Q03692 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
COL10A1Q03692 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
COL10A1Q03692 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.13■□□□□ 0.01
COL10A1Q03692 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
COL10A1Q03692 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.13■□□□□ 0.01
COL10A1Q03692 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.13■□□□□ 0.01
COL10A1Q03692 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
COL10A1Q03692 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
COL10A1Q03692 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
COL10A1Q03692 TNRC18P3-201ENST00000441896 2691 ntBASIC15.13■□□□□ 0.01
COL10A1Q03692 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL10A1Q03692 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL10A1Q03692 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL10A1Q03692 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL10A1Q03692 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
COL10A1Q03692 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.12■□□□□ 0.01
COL10A1Q03692 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL10A1Q03692 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL10A1Q03692 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL10A1Q03692 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL10A1Q03692 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL10A1Q03692 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL10A1Q03692 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL10A1Q03692 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL10A1Q03692 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
COL10A1Q03692 LINC00167-201ENST00000530583 1419 ntBASIC15.12■□□□□ 0.01
COL10A1Q03692 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.12■□□□□ 0.01
COL10A1Q03692 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL10A1Q03692 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL10A1Q03692 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.12■□□□□ 0.01
COL10A1Q03692 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.12■□□□□ 0.01
COL10A1Q03692 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL10A1Q03692 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.12■□□□□ 0.01
COL10A1Q03692 AC063952.2-201ENST00000498792 1227 ntBASIC15.12■□□□□ 0.01
COL10A1Q03692 AC113404.2-201ENST00000507884 177 ntBASIC15.12■□□□□ 0.01
COL10A1Q03692 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL10A1Q03692 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.12■□□□□ 0.01
COL10A1Q03692 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.12■□□□□ 0.01
COL10A1Q03692 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.12■□□□□ 0.01
COL10A1Q03692 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.12■□□□□ 0.01
COL10A1Q03692 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
COL10A1Q03692 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
COL10A1Q03692 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.12■□□□□ 0.01
COL10A1Q03692 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
COL10A1Q03692 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.12■□□□□ 0.01
COL10A1Q03692 KRT89P-201ENST00000620027 1478 ntBASIC15.12■□□□□ 0.01
COL10A1Q03692 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.12■□□□□ 0.01
COL10A1Q03692 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.12■□□□□ 0.01
COL10A1Q03692 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL10A1Q03692 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL10A1Q03692 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL10A1Q03692 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.12■□□□□ 0.01
COL10A1Q03692 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COL10A1Q03692 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
COL10A1Q03692 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL10A1Q03692 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL10A1Q03692 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL10A1Q03692 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COL10A1Q03692 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL10A1Q03692 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.11■□□□□ 0.01
COL10A1Q03692 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COL10A1Q03692 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COL10A1Q03692 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL10A1Q03692 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL10A1Q03692 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms