Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.08■□□□□ 0.48
LIMK2P53671 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.08■□□□□ 0.48
LIMK2P53671 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LIMK2P53671 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK2P53671 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK2P53671 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK2P53671 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK2P53671 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LIMK2P53671 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK2P53671 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LIMK2P53671 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK2P53671 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LIMK2P53671 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK2P53671 DUTP2-201ENST00000519164 463 ntBASIC18.07■□□□□ 0.48
LIMK2P53671 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.07■□□□□ 0.48
LIMK2P53671 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.07■□□□□ 0.48
LIMK2P53671 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.07■□□□□ 0.48
LIMK2P53671 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.07■□□□□ 0.48
LIMK2P53671 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.07■□□□□ 0.48
LIMK2P53671 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK2P53671 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK2P53671 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
LIMK2P53671 AC024243.1-201ENST00000609234 778 ntBASIC18.07■□□□□ 0.48
LIMK2P53671 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.07■□□□□ 0.48
LIMK2P53671 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.07■□□□□ 0.48
LIMK2P53671 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK2P53671 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK2P53671 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK2P53671 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK2P53671 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LIMK2P53671 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK2P53671 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
LIMK2P53671 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK2P53671 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK2P53671 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
LIMK2P53671 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
LIMK2P53671 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK2P53671 AC132938.6-201ENST00000623828 1655 ntBASIC18.06■□□□□ 0.48
LIMK2P53671 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LIMK2P53671 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK2P53671 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK2P53671 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK2P53671 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK2P53671 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.06■□□□□ 0.48
LIMK2P53671 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK2P53671 SPDYE13P-201ENST00000445314 798 ntBASIC18.06■□□□□ 0.48
LIMK2P53671 SEC1P-202ENST00000473944 940 ntBASIC18.06■□□□□ 0.48
LIMK2P53671 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.06■□□□□ 0.48
LIMK2P53671 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.06■□□□□ 0.48
LIMK2P53671 KRT126P-201ENST00000549467 1181 ntBASIC18.06■□□□□ 0.48
LIMK2P53671 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.06■□□□□ 0.48
LIMK2P53671 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK2P53671 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.06■□□□□ 0.48
LIMK2P53671 AL645608.8-201ENST00000606034 2086 ntBASIC18.06■□□□□ 0.48
LIMK2P53671 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK2P53671 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.06■□□□□ 0.48
LIMK2P53671 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK2P53671 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK2P53671 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK2P53671 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.06■□□□□ 0.48
LIMK2P53671 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.06■□□□□ 0.48
LIMK2P53671 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LIMK2P53671 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.05■□□□□ 0.48
LIMK2P53671 HCG4P8-203ENST00000443049 980 ntBASIC18.05■□□□□ 0.48
LIMK2P53671 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.05■□□□□ 0.48
LIMK2P53671 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.05■□□□□ 0.48
LIMK2P53671 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.05■□□□□ 0.48
LIMK2P53671 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.05■□□□□ 0.48
LIMK2P53671 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.05■□□□□ 0.48
LIMK2P53671 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LIMK2P53671 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.05■□□□□ 0.48
LIMK2P53671 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
LIMK2P53671 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 HTR7P1-202ENST00000624664 4411 ntBASIC18.05■□□□□ 0.48
LIMK2P53671 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK2P53671 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.05■□□□□ 0.48
LIMK2P53671 FZD10-202ENST00000539839 3282 ntBASIC18.04■□□□□ 0.48
LIMK2P53671 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LIMK2P53671 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK2P53671 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK2P53671 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK2P53671 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK2P53671 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms