Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HCFC1P51610 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.55■□□□□ 0.08
HCFC1P51610 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCFC1P51610 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HCFC1P51610 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCFC1P51610 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.55■□□□□ 0.08
HCFC1P51610 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCFC1P51610 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCFC1P51610 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HCFC1P51610 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCFC1P51610 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.55■□□□□ 0.08
HCFC1P51610 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.55■□□□□ 0.08
HCFC1P51610 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCFC1P51610 MCCD1P2-201ENST00000423228 335 ntBASIC15.55■□□□□ 0.08
HCFC1P51610 AC136632.2-201ENST00000512891 861 ntBASIC15.55■□□□□ 0.08
HCFC1P51610 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.55■□□□□ 0.08
HCFC1P51610 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.55■□□□□ 0.08
HCFC1P51610 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HCFC1P51610 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.54■□□□□ 0.08
HCFC1P51610 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCFC1P51610 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCFC1P51610 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCFC1P51610 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
HCFC1P51610 NCF1C-201ENST00000438382 1427 ntBASIC15.54■□□□□ 0.08
HCFC1P51610 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCFC1P51610 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.54■□□□□ 0.08
HCFC1P51610 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.54■□□□□ 0.08
HCFC1P51610 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HCFC1P51610 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.54■□□□□ 0.08
HCFC1P51610 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
HCFC1P51610 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.54■□□□□ 0.08
HCFC1P51610 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCFC1P51610 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCFC1P51610 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.54■□□□□ 0.08
HCFC1P51610 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCFC1P51610 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCFC1P51610 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCFC1P51610 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.54■□□□□ 0.08
HCFC1P51610 CRYGEP-201ENST00000412192 528 ntBASIC15.54■□□□□ 0.08
HCFC1P51610 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HCFC1P51610 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.54■□□□□ 0.08
HCFC1P51610 AC018845.2-201ENST00000568326 409 ntBASIC15.54■□□□□ 0.08
HCFC1P51610 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.54■□□□□ 0.08
HCFC1P51610 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.54■□□□□ 0.08
HCFC1P51610 AC104581.1-202ENST00000635932 2618 ntBASIC15.54■□□□□ 0.08
HCFC1P51610 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.54■□□□□ 0.08
HCFC1P51610 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCFC1P51610 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
HCFC1P51610 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.54■□□□□ 0.08
HCFC1P51610 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCFC1P51610 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HCFC1P51610 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HCFC1P51610 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCFC1P51610 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCFC1P51610 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HCFC1P51610 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCFC1P51610 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HCFC1P51610 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HCFC1P51610 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.53■□□□□ 0.08
HCFC1P51610 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
HCFC1P51610 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.53■□□□□ 0.08
HCFC1P51610 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HCFC1P51610 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.53■□□□□ 0.08
HCFC1P51610 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.53■□□□□ 0.08
HCFC1P51610 KRT18P2-201ENST00000447938 1258 ntBASIC15.53■□□□□ 0.08
HCFC1P51610 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.53■□□□□ 0.08
HCFC1P51610 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.53■□□□□ 0.08
HCFC1P51610 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.53■□□□□ 0.08
HCFC1P51610 AC006557.2-201ENST00000592985 1240 ntBASIC15.53■□□□□ 0.08
HCFC1P51610 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
HCFC1P51610 PGM5P2-202ENST00000637225 1043 ntBASIC15.53■□□□□ 0.08
HCFC1P51610 AC148477.5-201ENST00000625164 1645 ntBASIC15.53■□□□□ 0.08
HCFC1P51610 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.53■□□□□ 0.08
HCFC1P51610 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCFC1P51610 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HCFC1P51610 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCFC1P51610 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.53■□□□□ 0.08
HCFC1P51610 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCFC1P51610 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HCFC1P51610 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HCFC1P51610 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HCFC1P51610 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCFC1P51610 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
HCFC1P51610 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HCFC1P51610 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.53■□□□□ 0.08
HCFC1P51610 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCFC1P51610 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCFC1P51610 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCFC1P51610 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCFC1P51610 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCFC1P51610 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.53■□□□□ 0.08
HCFC1P51610 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.53■□□□□ 0.08
HCFC1P51610 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.53■□□□□ 0.08
HCFC1P51610 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.53■□□□□ 0.08
HCFC1P51610 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.53■□□□□ 0.08
HCFC1P51610 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.53■□□□□ 0.08
HCFC1P51610 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.53■□□□□ 0.08
HCFC1P51610 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.53■□□□□ 0.08
HCFC1P51610 AC004817.3-201ENST00000602957 2129 ntBASIC15.53■□□□□ 0.08
HCFC1P51610 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms