Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.76■□□□□ 0.75
CPT1AP50416 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CPT1AP50416 SIRPAP1-201ENST00000448467 1770 ntBASIC19.76■□□□□ 0.75
CPT1AP50416 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.76■□□□□ 0.75
CPT1AP50416 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPT1AP50416 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPT1AP50416 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CPT1AP50416 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CPT1AP50416 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.76■□□□□ 0.75
CPT1AP50416 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.76■□□□□ 0.75
CPT1AP50416 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.76■□□□□ 0.75
CPT1AP50416 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.76■□□□□ 0.75
CPT1AP50416 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPT1AP50416 MTDHP5-201ENST00000598980 586 ntBASIC19.76■□□□□ 0.75
CPT1AP50416 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.76■□□□□ 0.75
CPT1AP50416 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.76■□□□□ 0.75
CPT1AP50416 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.76■□□□□ 0.75
CPT1AP50416 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.76■□□□□ 0.75
CPT1AP50416 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPT1AP50416 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CPT1AP50416 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPT1AP50416 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.75■□□□□ 0.75
CPT1AP50416 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPT1AP50416 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.75■□□□□ 0.75
CPT1AP50416 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPT1AP50416 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPT1AP50416 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPT1AP50416 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPT1AP50416 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.75■□□□□ 0.75
CPT1AP50416 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.75■□□□□ 0.75
CPT1AP50416 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.75■□□□□ 0.75
CPT1AP50416 AC004706.3-202ENST00000621574 984 ntBASIC19.75■□□□□ 0.75
CPT1AP50416 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPT1AP50416 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.75■□□□□ 0.75
CPT1AP50416 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.75■□□□□ 0.75
CPT1AP50416 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CPT1AP50416 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.75■□□□□ 0.75
CPT1AP50416 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPT1AP50416 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.75■□□□□ 0.75
CPT1AP50416 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPT1AP50416 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPT1AP50416 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPT1AP50416 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
CPT1AP50416 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.74■□□□□ 0.75
CPT1AP50416 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPT1AP50416 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPT1AP50416 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPT1AP50416 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.74■□□□□ 0.75
CPT1AP50416 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.74■□□□□ 0.75
CPT1AP50416 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPT1AP50416 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPT1AP50416 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPT1AP50416 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPT1AP50416 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPT1AP50416 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.74■□□□□ 0.75
CPT1AP50416 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPT1AP50416 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.74■□□□□ 0.75
CPT1AP50416 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.74■□□□□ 0.75
CPT1AP50416 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.74■□□□□ 0.75
CPT1AP50416 AC004967.1-201ENST00000453589 447 ntBASIC19.74■□□□□ 0.75
CPT1AP50416 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.74■□□□□ 0.75
CPT1AP50416 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.74■□□□□ 0.75
CPT1AP50416 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.74■□□□□ 0.75
CPT1AP50416 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPT1AP50416 AP001160.2-201ENST00000596071 487 ntBASIC19.74■□□□□ 0.75
CPT1AP50416 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CPT1AP50416 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.74■□□□□ 0.75
CPT1AP50416 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPT1AP50416 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPT1AP50416 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPT1AP50416 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
CPT1AP50416 AL049757.1-201ENST00000616842 1596 ntBASIC19.74■□□□□ 0.75
CPT1AP50416 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPT1AP50416 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPT1AP50416 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPT1AP50416 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPT1AP50416 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.73■□□□□ 0.75
CPT1AP50416 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPT1AP50416 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.73■□□□□ 0.75
CPT1AP50416 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPT1AP50416 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPT1AP50416 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPT1AP50416 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.73■□□□□ 0.75
CPT1AP50416 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CPT1AP50416 AC023274.1-201ENST00000418278 595 ntBASIC19.73■□□□□ 0.75
CPT1AP50416 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CPT1AP50416 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
CPT1AP50416 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.73■□□□□ 0.75
CPT1AP50416 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.73■□□□□ 0.75
CPT1AP50416 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPT1AP50416 NCF1C-201ENST00000438382 1427 ntBASIC19.73■□□□□ 0.75
CPT1AP50416 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CPT1AP50416 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPT1AP50416 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.73■□□□□ 0.75
CPT1AP50416 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CPT1AP50416 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CPT1AP50416 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.72■□□□□ 0.75
CPT1AP50416 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CPT1AP50416 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPT1AP50416 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms