Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PCP4P48539 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC12.28□□□□□ -0.44
PCP4P48539 LINC00528-201ENST00000600723 2160 ntBASIC12.28□□□□□ -0.44
PCP4P48539 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCP4P48539 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCP4P48539 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCP4P48539 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCP4P48539 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCP4P48539 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.27□□□□□ -0.44
PCP4P48539 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCP4P48539 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCP4P48539 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCP4P48539 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCP4P48539 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
PCP4P48539 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PCP4P48539 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.27□□□□□ -0.44
PCP4P48539 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PCP4P48539 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCP4P48539 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PCP4P48539 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PCP4P48539 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.27□□□□□ -0.45
PCP4P48539 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
PCP4P48539 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
PCP4P48539 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.27□□□□□ -0.45
PCP4P48539 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.27□□□□□ -0.45
PCP4P48539 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
PCP4P48539 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.27□□□□□ -0.45
PCP4P48539 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.27□□□□□ -0.45
PCP4P48539 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 SSR4P1-203ENST00000599569 2260 ntBASIC12.27□□□□□ -0.45
PCP4P48539 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.27□□□□□ -0.45
PCP4P48539 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
PCP4P48539 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PCP4P48539 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
PCP4P48539 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
PCP4P48539 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PCP4P48539 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCP4P48539 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
PCP4P48539 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
PCP4P48539 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC12.26□□□□□ -0.45
PCP4P48539 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.26□□□□□ -0.45
PCP4P48539 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PCP4P48539 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
PCP4P48539 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.26□□□□□ -0.45
PCP4P48539 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
PCP4P48539 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.26□□□□□ -0.45
PCP4P48539 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.26□□□□□ -0.45
PCP4P48539 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
PCP4P48539 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.26□□□□□ -0.45
PCP4P48539 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.26□□□□□ -0.45
PCP4P48539 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.26□□□□□ -0.45
PCP4P48539 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.26□□□□□ -0.45
PCP4P48539 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PCP4P48539 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
PCP4P48539 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
PCP4P48539 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.26□□□□□ -0.45
PCP4P48539 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.26□□□□□ -0.45
PCP4P48539 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCP4P48539 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
PCP4P48539 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
PCP4P48539 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PCP4P48539 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms