Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC7.92□□□□□ -1.14
USH2AO75445 AC008667.4-201ENST00000607370 168 ntBASIC7.92□□□□□ -1.14
USH2AO75445 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 AC007952.6-201ENST00000573168 2673 ntBASIC7.92□□□□□ -1.14
USH2AO75445 AC003957.1-201ENST00000625108 2673 ntBASIC7.92□□□□□ -1.14
USH2AO75445 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC7.92□□□□□ -1.14
USH2AO75445 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC7.92□□□□□ -1.14
USH2AO75445 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
USH2AO75445 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC7.92□□□□□ -1.14
USH2AO75445 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
USH2AO75445 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC7.92□□□□□ -1.14
USH2AO75445 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC7.92□□□□□ -1.14
USH2AO75445 SSH2-210ENST00000582084 560 ntTSL 3 BASIC7.92□□□□□ -1.14
USH2AO75445 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC7.92□□□□□ -1.14
USH2AO75445 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC7.92□□□□□ -1.14
USH2AO75445 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC7.92□□□□□ -1.14
USH2AO75445 TMEM14DP-201ENST00000422205 345 ntBASIC7.92□□□□□ -1.14
USH2AO75445 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 AC004890.2-204ENST00000481968 304 ntBASIC7.92□□□□□ -1.14
USH2AO75445 AC019129.2-201ENST00000609837 1235 ntBASIC7.92□□□□□ -1.14
USH2AO75445 AL353593.2-201ENST00000602529 1483 ntBASIC7.92□□□□□ -1.14
USH2AO75445 NFYC-AS1-201ENST00000606277 1687 ntBASIC7.92□□□□□ -1.14
USH2AO75445 AL024508.2-201ENST00000607749 1894 ntBASIC7.92□□□□□ -1.14
USH2AO75445 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
USH2AO75445 NCF1C-201ENST00000438382 1427 ntBASIC7.92□□□□□ -1.14
USH2AO75445 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC7.92□□□□□ -1.14
USH2AO75445 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC7.92□□□□□ -1.14
USH2AO75445 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC7.92□□□□□ -1.14
USH2AO75445 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USH2AO75445 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC7.92□□□□□ -1.14
USH2AO75445 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC7.92□□□□□ -1.14
USH2AO75445 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC7.92□□□□□ -1.14
USH2AO75445 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC7.92□□□□□ -1.14
USH2AO75445 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC7.92□□□□□ -1.14
USH2AO75445 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
USH2AO75445 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 KRT18P32-201ENST00000424695 1287 ntBASIC7.91□□□□□ -1.14
USH2AO75445 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC7.91□□□□□ -1.14
USH2AO75445 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 AC097493.3-201ENST00000509725 367 ntBASIC7.91□□□□□ -1.14
USH2AO75445 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC7.91□□□□□ -1.14
USH2AO75445 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC7.91□□□□□ -1.14
USH2AO75445 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC7.91□□□□□ -1.14
USH2AO75445 RETN-203ENST00000629642 400 ntTSL 5 BASIC7.91□□□□□ -1.14
USH2AO75445 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
USH2AO75445 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 FAM86MP-201ENST00000340703 885 ntBASIC7.91□□□□□ -1.14
USH2AO75445 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
USH2AO75445 KRT17P8-201ENST00000540749 863 ntBASIC7.91□□□□□ -1.14
USH2AO75445 MIR4259-201ENST00000584466 101 ntBASIC7.91□□□□□ -1.14
USH2AO75445 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC7.91□□□□□ -1.14
USH2AO75445 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC7.91□□□□□ -1.14
USH2AO75445 AP001059.3-201ENST00000619053 235 ntBASIC7.91□□□□□ -1.14
USH2AO75445 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC7.91□□□□□ -1.14
USH2AO75445 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC7.91□□□□□ -1.14
USH2AO75445 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC7.91□□□□□ -1.14
USH2AO75445 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USH2AO75445 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms