Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN1O60925 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.02■□□□□ 0.16
PFDN1O60925 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.02■□□□□ 0.16
PFDN1O60925 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN1O60925 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.02■□□□□ 0.16
PFDN1O60925 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN1O60925 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PFDN1O60925 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.02■□□□□ 0.16
PFDN1O60925 AC092028.1-203ENST00000608262 953 ntBASIC16.02■□□□□ 0.16
PFDN1O60925 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN1O60925 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.02■□□□□ 0.16
PFDN1O60925 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.02■□□□□ 0.16
PFDN1O60925 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN1O60925 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN1O60925 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.02■□□□□ 0.15
PFDN1O60925 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN1O60925 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN1O60925 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN1O60925 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN1O60925 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PFDN1O60925 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN1O60925 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN1O60925 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PFDN1O60925 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.01■□□□□ 0.15
PFDN1O60925 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN1O60925 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PFDN1O60925 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.01■□□□□ 0.15
PFDN1O60925 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.01■□□□□ 0.15
PFDN1O60925 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PFDN1O60925 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
PFDN1O60925 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.01■□□□□ 0.15
PFDN1O60925 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN1O60925 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN1O60925 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
PFDN1O60925 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN1O60925 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN1O60925 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN1O60925 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN1O60925 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.01■□□□□ 0.15
PFDN1O60925 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.01■□□□□ 0.15
PFDN1O60925 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.01■□□□□ 0.15
PFDN1O60925 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.01■□□□□ 0.15
PFDN1O60925 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.01■□□□□ 0.15
PFDN1O60925 SMUG1P1-201ENST00000590640 811 ntBASIC16.01■□□□□ 0.15
PFDN1O60925 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN1O60925 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN1O60925 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.01■□□□□ 0.15
PFDN1O60925 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
PFDN1O60925 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PFDN1O60925 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.01■□□□□ 0.15
PFDN1O60925 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PFDN1O60925 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.01■□□□□ 0.15
PFDN1O60925 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.01■□□□□ 0.15
PFDN1O60925 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PFDN1O60925 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN1O60925 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN1O60925 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PFDN1O60925 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN1O60925 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN1O60925 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PFDN1O60925 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PFDN1O60925 SNX18-202ENST00000343017 3140 ntBASIC16.01■□□□□ 0.15
PFDN1O60925 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
PFDN1O60925 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16■□□□□ 0.15
PFDN1O60925 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16■□□□□ 0.15
PFDN1O60925 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16■□□□□ 0.15
PFDN1O60925 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16■□□□□ 0.15
PFDN1O60925 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PFDN1O60925 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PFDN1O60925 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 YBX1P4-201ENST00000392794 808 ntBASIC16■□□□□ 0.15
PFDN1O60925 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16■□□□□ 0.15
PFDN1O60925 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16■□□□□ 0.15
PFDN1O60925 AC103724.3-201ENST00000564481 992 ntBASIC16■□□□□ 0.15
PFDN1O60925 FAM21FP-204ENST00000608637 956 ntBASIC16■□□□□ 0.15
PFDN1O60925 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
PFDN1O60925 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
PFDN1O60925 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16■□□□□ 0.15
PFDN1O60925 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16■□□□□ 0.15
PFDN1O60925 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16■□□□□ 0.15
PFDN1O60925 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
PFDN1O60925 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PFDN1O60925 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PFDN1O60925 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms