Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HCN1O60741 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.76■□□□□ 0.27
HCN1O60741 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.76■□□□□ 0.27
HCN1O60741 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.76■□□□□ 0.27
HCN1O60741 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 AC008764.6-201ENST00000595909 2069 ntBASIC16.76■□□□□ 0.27
HCN1O60741 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.76■□□□□ 0.27
HCN1O60741 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HCN1O60741 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HCN1O60741 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
HCN1O60741 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.76■□□□□ 0.27
HCN1O60741 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.76■□□□□ 0.27
HCN1O60741 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.76■□□□□ 0.27
HCN1O60741 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
HCN1O60741 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.76■□□□□ 0.27
HCN1O60741 AC009065.1-201ENST00000564055 1225 ntBASIC16.76■□□□□ 0.27
HCN1O60741 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
HCN1O60741 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.76■□□□□ 0.27
HCN1O60741 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.76■□□□□ 0.27
HCN1O60741 AL136038.4-201ENST00000603606 1261 ntBASIC16.76■□□□□ 0.27
HCN1O60741 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.76■□□□□ 0.27
HCN1O60741 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.76■□□□□ 0.27
HCN1O60741 AC093458.2-201ENST00000623150 629 ntBASIC16.76■□□□□ 0.27
HCN1O60741 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.76■□□□□ 0.27
HCN1O60741 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HCN1O60741 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HCN1O60741 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HCN1O60741 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
HCN1O60741 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.76■□□□□ 0.27
HCN1O60741 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCN1O60741 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.76■□□□□ 0.27
HCN1O60741 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.76■□□□□ 0.27
HCN1O60741 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCN1O60741 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCN1O60741 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCN1O60741 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCN1O60741 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCN1O60741 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCN1O60741 SIRPAP1-201ENST00000448467 1770 ntBASIC16.75■□□□□ 0.27
HCN1O60741 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCN1O60741 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.75■□□□□ 0.27
HCN1O60741 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.75■□□□□ 0.27
HCN1O60741 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HCN1O60741 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.75■□□□□ 0.27
HCN1O60741 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.75■□□□□ 0.27
HCN1O60741 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.75■□□□□ 0.27
HCN1O60741 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HCN1O60741 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.75■□□□□ 0.27
HCN1O60741 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.75■□□□□ 0.27
HCN1O60741 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCN1O60741 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.75■□□□□ 0.27
HCN1O60741 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCN1O60741 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HCN1O60741 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.75■□□□□ 0.27
HCN1O60741 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCN1O60741 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.75■□□□□ 0.27
HCN1O60741 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCN1O60741 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HCN1O60741 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.75■□□□□ 0.27
HCN1O60741 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HCN1O60741 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
HCN1O60741 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HCN1O60741 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCN1O60741 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 AL391807.1-203ENST00000604392 2365 ntBASIC16.74■□□□□ 0.27
HCN1O60741 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.74■□□□□ 0.27
HCN1O60741 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.74■□□□□ 0.27
HCN1O60741 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.74■□□□□ 0.27
HCN1O60741 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HCN1O60741 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.74■□□□□ 0.27
HCN1O60741 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HCN1O60741 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
HCN1O60741 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms