Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF9O60383 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF9O60383 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF9O60383 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF9O60383 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
GDF9O60383 IGHV3-65-201ENST00000523210 341 ntBASIC17.36■□□□□ 0.37
GDF9O60383 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.36■□□□□ 0.37
GDF9O60383 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.36■□□□□ 0.37
GDF9O60383 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.36■□□□□ 0.37
GDF9O60383 AC025678.2-201ENST00000562061 970 ntBASIC17.36■□□□□ 0.37
GDF9O60383 NIFKP4-201ENST00000567275 1192 ntBASIC17.36■□□□□ 0.37
GDF9O60383 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
GDF9O60383 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.36■□□□□ 0.37
GDF9O60383 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
GDF9O60383 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GDF9O60383 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.36■□□□□ 0.37
GDF9O60383 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF9O60383 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF9O60383 BCAR1-209ENST00000546196 1340 ntBASIC17.36■□□□□ 0.37
GDF9O60383 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GDF9O60383 SIGLEC16-201ENST00000599858 1437 ntBASIC17.36■□□□□ 0.37
GDF9O60383 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.35■□□□□ 0.37
GDF9O60383 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.35■□□□□ 0.37
GDF9O60383 AC116562.4-201ENST00000641316 2276 ntBASIC17.35■□□□□ 0.37
GDF9O60383 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF9O60383 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF9O60383 AC004461.1-201ENST00000412461 403 ntBASIC17.35■□□□□ 0.37
GDF9O60383 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GDF9O60383 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.35■□□□□ 0.37
GDF9O60383 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GDF9O60383 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.35■□□□□ 0.37
GDF9O60383 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.35■□□□□ 0.37
GDF9O60383 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.35■□□□□ 0.37
GDF9O60383 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.35■□□□□ 0.37
GDF9O60383 AD001527.2-201ENST00000622994 785 ntBASIC17.35■□□□□ 0.37
GDF9O60383 Z92544.3-201ENST00000624747 417 ntBASIC17.35■□□□□ 0.37
GDF9O60383 AL513210.1-201ENST00000629608 234 ntBASIC17.35■□□□□ 0.37
GDF9O60383 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.35■□□□□ 0.37
GDF9O60383 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GDF9O60383 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.35■□□□□ 0.37
GDF9O60383 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF9O60383 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
GDF9O60383 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
GDF9O60383 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.35■□□□□ 0.37
GDF9O60383 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF9O60383 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDF9O60383 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
GDF9O60383 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
GDF9O60383 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDF9O60383 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDF9O60383 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GDF9O60383 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDF9O60383 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.34■□□□□ 0.37
GDF9O60383 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.34■□□□□ 0.37
GDF9O60383 RPS15P9-201ENST00000494093 319 ntBASIC17.34■□□□□ 0.37
GDF9O60383 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.34■□□□□ 0.37
GDF9O60383 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
GDF9O60383 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GDF9O60383 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
GDF9O60383 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.34■□□□□ 0.37
GDF9O60383 KRT19P2-202ENST00000557173 1012 ntBASIC17.34■□□□□ 0.37
GDF9O60383 AC093520.2-201ENST00000561830 333 ntBASIC17.34■□□□□ 0.37
GDF9O60383 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.34■□□□□ 0.37
GDF9O60383 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.34■□□□□ 0.37
GDF9O60383 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
GDF9O60383 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDF9O60383 AL390955.2-201ENST00000603032 514 ntBASIC17.34■□□□□ 0.37
GDF9O60383 AC008667.4-201ENST00000607370 168 ntBASIC17.34■□□□□ 0.37
GDF9O60383 AC005332.7-201ENST00000614046 2005 ntBASIC17.34■□□□□ 0.37
GDF9O60383 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDF9O60383 AC010507.1-201ENST00000633895 436 ntBASIC17.34■□□□□ 0.37
GDF9O60383 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GDF9O60383 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.34■□□□□ 0.37
GDF9O60383 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GDF9O60383 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDF9O60383 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDF9O60383 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.33■□□□□ 0.37
GDF9O60383 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.33■□□□□ 0.37
GDF9O60383 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GDF9O60383 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GDF9O60383 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
GDF9O60383 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
GDF9O60383 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GDF9O60383 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GDF9O60383 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GDF9O60383 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.33■□□□□ 0.36
GDF9O60383 ACTG1P14-201ENST00000446382 1122 ntBASIC17.33■□□□□ 0.36
GDF9O60383 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
GDF9O60383 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.33■□□□□ 0.36
GDF9O60383 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.33■□□□□ 0.36
GDF9O60383 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.33■□□□□ 0.36
GDF9O60383 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.33■□□□□ 0.36
GDF9O60383 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.33■□□□□ 0.36
GDF9O60383 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
GDF9O60383 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
GDF9O60383 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GDF9O60383 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GDF9O60383 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GDF9O60383 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.33■□□□□ 0.36
GDF9O60383 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms