Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.91■□□□□ 0.46
LDB2O43679 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.91■□□□□ 0.46
LDB2O43679 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.91■□□□□ 0.46
LDB2O43679 LETM1P2-201ENST00000597330 2178 ntBASIC17.91■□□□□ 0.46
LDB2O43679 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.91■□□□□ 0.46
LDB2O43679 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.91■□□□□ 0.46
LDB2O43679 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LDB2O43679 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.9■□□□□ 0.46
LDB2O43679 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LDB2O43679 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.9■□□□□ 0.46
LDB2O43679 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.9■□□□□ 0.46
LDB2O43679 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.9■□□□□ 0.46
LDB2O43679 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.9■□□□□ 0.46
LDB2O43679 AC116407.2-201ENST00000613639 860 ntBASIC17.9■□□□□ 0.46
LDB2O43679 AC116407.4-201ENST00000623319 1061 ntBASIC17.9■□□□□ 0.46
LDB2O43679 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.9■□□□□ 0.46
LDB2O43679 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.9■□□□□ 0.46
LDB2O43679 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LDB2O43679 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LDB2O43679 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.9■□□□□ 0.46
LDB2O43679 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
LDB2O43679 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LDB2O43679 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB2O43679 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.9■□□□□ 0.46
LDB2O43679 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.9■□□□□ 0.46
LDB2O43679 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.9■□□□□ 0.46
LDB2O43679 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
LDB2O43679 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LDB2O43679 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.89■□□□□ 0.45
LDB2O43679 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.89■□□□□ 0.45
LDB2O43679 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LDB2O43679 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.89■□□□□ 0.45
LDB2O43679 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LDB2O43679 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LDB2O43679 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LDB2O43679 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LDB2O43679 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.89■□□□□ 0.45
LDB2O43679 KRT8P26-201ENST00000534154 1276 ntBASIC17.89■□□□□ 0.45
LDB2O43679 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.89■□□□□ 0.45
LDB2O43679 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.89■□□□□ 0.45
LDB2O43679 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LDB2O43679 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LDB2O43679 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LDB2O43679 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LDB2O43679 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.89■□□□□ 0.45
LDB2O43679 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LDB2O43679 AL355312.1-201ENST00000407115 2176 ntBASIC17.89■□□□□ 0.45
LDB2O43679 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
LDB2O43679 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LDB2O43679 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.88■□□□□ 0.45
LDB2O43679 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LDB2O43679 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.88■□□□□ 0.45
LDB2O43679 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.88■□□□□ 0.45
LDB2O43679 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
LDB2O43679 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.88■□□□□ 0.45
LDB2O43679 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LDB2O43679 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LDB2O43679 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LDB2O43679 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.88■□□□□ 0.45
LDB2O43679 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.88■□□□□ 0.45
LDB2O43679 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LDB2O43679 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.88■□□□□ 0.45
LDB2O43679 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LDB2O43679 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.88■□□□□ 0.45
LDB2O43679 DDX43P3-201ENST00000441064 443 ntBASIC17.88■□□□□ 0.45
LDB2O43679 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LDB2O43679 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.88■□□□□ 0.45
LDB2O43679 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.88■□□□□ 0.45
LDB2O43679 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LDB2O43679 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
LDB2O43679 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.88■□□□□ 0.45
LDB2O43679 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.88■□□□□ 0.45
LDB2O43679 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LDB2O43679 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LDB2O43679 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LDB2O43679 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LDB2O43679 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LDB2O43679 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms