Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 AC116050.2-201ENST00000612102 1779 ntBASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 KRT16P6-202ENST00000425692 1426 ntBASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 KRT8P36-201ENST00000489121 1440 ntBASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 HYI-213ENST00000583037 1322 ntTSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 RNF146-206ENST00000480444 843 ntTSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CHKB-CPT1BH3BT56 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms