Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PALM3A6NDB9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.67■□□□□ 0.9
PALM3A6NDB9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.67■□□□□ 0.9
PALM3A6NDB9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PALM3A6NDB9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PALM3A6NDB9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PALM3A6NDB9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PALM3A6NDB9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PALM3A6NDB9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PALM3A6NDB9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.67■□□□□ 0.9
PALM3A6NDB9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PALM3A6NDB9 AC009949.1-201ENST00000623048 1830 ntBASIC20.67■□□□□ 0.9
PALM3A6NDB9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.66■□□□□ 0.9
PALM3A6NDB9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
PALM3A6NDB9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PALM3A6NDB9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PALM3A6NDB9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PALM3A6NDB9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PALM3A6NDB9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PALM3A6NDB9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PALM3A6NDB9 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.66■□□□□ 0.9
PALM3A6NDB9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.66■□□□□ 0.9
PALM3A6NDB9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.66■□□□□ 0.9
PALM3A6NDB9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PALM3A6NDB9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.66■□□□□ 0.9
PALM3A6NDB9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.66■□□□□ 0.9
PALM3A6NDB9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.66■□□□□ 0.9
PALM3A6NDB9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.66■□□□□ 0.9
PALM3A6NDB9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.66■□□□□ 0.9
PALM3A6NDB9 AL591684.3-201ENST00000605187 298 ntBASIC20.66■□□□□ 0.9
PALM3A6NDB9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.66■□□□□ 0.9
PALM3A6NDB9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PALM3A6NDB9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PALM3A6NDB9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PALM3A6NDB9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.66■□□□□ 0.9
PALM3A6NDB9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PALM3A6NDB9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PALM3A6NDB9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PALM3A6NDB9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PALM3A6NDB9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PALM3A6NDB9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PALM3A6NDB9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
PALM3A6NDB9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PALM3A6NDB9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PALM3A6NDB9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.65■□□□□ 0.9
PALM3A6NDB9 COX5BP2-201ENST00000392354 334 ntBASIC20.65■□□□□ 0.9
PALM3A6NDB9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.65■□□□□ 0.9
PALM3A6NDB9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.65■□□□□ 0.9
PALM3A6NDB9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PALM3A6NDB9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
PALM3A6NDB9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PALM3A6NDB9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PALM3A6NDB9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.65■□□□□ 0.9
PALM3A6NDB9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PALM3A6NDB9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
PALM3A6NDB9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.64■□□□□ 0.9
PALM3A6NDB9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PALM3A6NDB9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.64■□□□□ 0.9
PALM3A6NDB9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PALM3A6NDB9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PALM3A6NDB9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PALM3A6NDB9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PALM3A6NDB9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 AC111152.3-201ENST00000569699 673 ntBASIC20.64■□□□□ 0.89
PALM3A6NDB9 RN7SL510P-201ENST00000581311 263 ntBASIC20.64■□□□□ 0.89
PALM3A6NDB9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 AC116407.2-201ENST00000613639 860 ntBASIC20.64■□□□□ 0.89
PALM3A6NDB9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.64■□□□□ 0.89
PALM3A6NDB9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PALM3A6NDB9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PALM3A6NDB9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PALM3A6NDB9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PALM3A6NDB9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PALM3A6NDB9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PALM3A6NDB9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.63■□□□□ 0.89
PALM3A6NDB9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PALM3A6NDB9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PALM3A6NDB9 AKR1C7P-201ENST00000305623 895 ntBASIC20.63■□□□□ 0.89
PALM3A6NDB9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PALM3A6NDB9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PALM3A6NDB9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PALM3A6NDB9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PALM3A6NDB9 FAM220CP-201ENST00000395253 831 ntBASIC20.63■□□□□ 0.89
PALM3A6NDB9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.63■□□□□ 0.89
PALM3A6NDB9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms