Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 AL356309.3-201ENST00000624132 1934 ntBASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 HNRNPDP1-201ENST00000439535 754 ntBASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 SART3-203ENST00000546611 1184 ntBASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3EA0A087X179 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 WIZP1-201ENST00000531444 2299 ntBASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 TNXA-203ENST00000507684 2038 ntBASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 AC021087.4-201ENST00000563761 564 ntBASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 AC139887.3-201ENST00000568585 713 ntBASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 AL049840.3-201ENST00000602669 611 ntBASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3EA0A087X179 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.78■□□□□ 0.44
TBC1D3EA0A087X179 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms