Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.21□□□□□ -0.462e-6■■□□□ 14.2
CSTF2TQ9H0L4 ACTN1-201ENST00000193403 3779 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.731e-6■■□□□ 14.2
CSTF2TQ9H0L4 ACTN1-203ENST00000394419 3464 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.871e-6■■□□□ 14.2
CSTF2TQ9H0L4 ACTN1-215ENST00000555616 919 ntTSL 38.97□□□□□ -0.972e-6■■□□□ 14.2
CSTF2TQ9H0L4 ACTN1-213ENST00000554508 585 ntTSL 48.21□□□□□ -1.11e-6■■□□□ 14.2
CSTF2TQ9H0L4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.263e-7■■□□□ 14.2
CSTF2TQ9H0L4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.043e-7■■□□□ 14.2
CSTF2TQ9H0L4 GRB10-202ENST00000357271 2050 ntTSL 1 (best) BASIC11.39□□□□□ -0.593e-7■■□□□ 14.2
CSTF2TQ9H0L4 GRB10-210ENST00000407526 2279 ntTSL 1 (best) BASIC11.04□□□□□ -0.643e-7■■□□□ 14.2
CSTF2TQ9H0L4 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.993e-7■■□□□ 14.2
CSTF2TQ9H0L4 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC8.82□□□□□ -13e-7■■□□□ 14.2
CSTF2TQ9H0L4 GABRE-205ENST00000465405 706 ntTSL 1 (best)8.26□□□□□ -1.093e-7■■□□□ 14.2
CSTF2TQ9H0L4 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC7.95□□□□□ -1.143e-7■■□□□ 14.2
CSTF2TQ9H0L4 SMAD3-212ENST00000559937 579 ntTSL 47.43□□□□□ -1.221e-6■■□□□ 14.2
CSTF2TQ9H0L4 SPRY4-AS1-204ENST00000510311 591 ntTSL 4 BASIC8.79□□□□□ -11e-6■■□□□ 14.2
CSTF2TQ9H0L4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.88□□□□□ -1.631e-6■■□□□ 14.2
CSTF2TQ9H0L4 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.8□□□□□ -0.365e-10■■□□□ 14.2
CSTF2TQ9H0L4 TCEA3-203ENST00000450454 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.665e-10■■□□□ 14.2
CSTF2TQ9H0L4 FGL1-204ENST00000398056 1967 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.88e-14■■□□□ 14.2
CSTF2TQ9H0L4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.66■□□□□ 0.95e-7■■□□□ 14.2
CSTF2TQ9H0L4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.895e-7■■□□□ 14.2
CSTF2TQ9H0L4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.895e-7■■□□□ 14.2
CSTF2TQ9H0L4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.835e-7■■□□□ 14.2
CSTF2TQ9H0L4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.815e-7■■□□□ 14.2
CSTF2TQ9H0L4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.85e-7■■□□□ 14.2
CSTF2TQ9H0L4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.775e-7■■□□□ 14.2
CSTF2TQ9H0L4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.755e-7■■□□□ 14.2
CSTF2TQ9H0L4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.33■□□□□ 0.25e-7■■□□□ 14.2
CSTF2TQ9H0L4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.04■□□□□ 0.165e-7■■□□□ 14.2
CSTF2TQ9H0L4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.98■□□□□ 0.155e-7■■□□□ 14.2
CSTF2TQ9H0L4 PRR5-211ENST00000475850 1965 ntTSL 216.37■□□□□ 0.212e-7■■□□□ 14.2
CSTF2TQ9H0L4 MIR3917-201ENST00000580971 93 ntBASIC17.11■□□□□ 0.334e-8■■□□□ 14.2
CSTF2TQ9H0L4 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC11.86□□□□□ -0.516e-6■■□□□ 14.2
CSTF2TQ9H0L4 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC11.68□□□□□ -0.546e-6■■□□□ 14.2
CSTF2TQ9H0L4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.373e-11■■□□□ 14.2
CSTF2TQ9H0L4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.072e-10■■□□□ 14.2
CSTF2TQ9H0L4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.515e-7■■□□□ 14.2
CSTF2TQ9H0L4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.036e-6■■□□□ 14.2
CSTF2TQ9H0L4 HIPK3-205ENST00000531504 591 ntTSL 218.98■□□□□ 0.631e-7■■□□□ 14.2
CSTF2TQ9H0L4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.431e-7■■□□□ 14.2
CSTF2TQ9H0L4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.38■□□□□ 0.216e-6■■□□□ 14.2
CSTF2TQ9H0L4 ALDOA-215ENST00000565355 538 ntTSL 514.5□□□□□ -0.092e-14■■□□□ 14.2
CSTF2TQ9H0L4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.131e-7■■□□□ 14.2
CSTF2TQ9H0L4 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.1□□□□□ -0.151e-7■■□□□ 14.2
CSTF2TQ9H0L4 ALDOA-217ENST00000566130 801 ntTSL 213.33□□□□□ -0.282e-14■■□□□ 14.2
CSTF2TQ9H0L4 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.31e-7■■□□□ 14.2
CSTF2TQ9H0L4 ADCY9-202ENST00000571467 569 ntTSL 512.23□□□□□ -0.451e-7■■□□□ 14.2
CSTF2TQ9H0L4 AGAP3-223ENST00000492234 560 ntTSL 412.23□□□□□ -0.451e-7■■□□□ 14.2
CSTF2TQ9H0L4 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.461e-7■■□□□ 14.2
CSTF2TQ9H0L4 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.491e-7■■□□□ 14.2
CSTF2TQ9H0L4 ADCY9-204ENST00000572288 772 ntTSL 411.9□□□□□ -0.51e-7■■□□□ 14.2
CSTF2TQ9H0L4 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC10.12□□□□□ -0.791e-7■■□□□ 14.2
CSTF2TQ9H0L4 IWS1-212ENST00000637187 1021 ntTSL 56.46□□□□□ -1.381e-7■■□□□ 14.2
CSTF2TQ9H0L4 COG5-209ENST00000484237 574 ntTSL 46.07□□□□□ -1.441e-7■■□□□ 14.2
CSTF2TQ9H0L4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.671e-7■■□□□ 14.2
CSTF2TQ9H0L4 CSNK1D-212ENST00000580061 578 ntTSL 314.57□□□□□ -0.081e-12■■□□□ 14.2
CSTF2TQ9H0L4 AC233280.19-201ENST00000633223 136 ntBASIC11.76□□□□□ -0.531e-6■■□□□ 14.2
CSTF2TQ9H0L4 RUNX1-216ENST00000482318 1710 ntTSL 1 (best)19.67■□□□□ 0.746e-7■■□□□ 14.2
CSTF2TQ9H0L4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.266e-7■■□□□ 14.2
CSTF2TQ9H0L4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.16e-7■■□□□ 14.2
CSTF2TQ9H0L4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.165e-9■■□□□ 14.2
CSTF2TQ9H0L4 CARD10-207ENST00000476871 583 ntTSL 419■□□□□ 0.632e-6■■□□□ 14.2
CSTF2TQ9H0L4 CARD10-210ENST00000494166 560 ntTSL 519■□□□□ 0.632e-6■■□□□ 14.2
CSTF2TQ9H0L4 BMP4-203ENST00000558489 605 ntTSL 314.16□□□□□ -0.141e-10■■□□□ 14.2
CSTF2TQ9H0L4 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.821e-7■■□□□ 14.2
CSTF2TQ9H0L4 PKP4-207ENST00000457109 520 ntTSL 38.43□□□□□ -1.061e-7■■□□□ 14.2
CSTF2TQ9H0L4 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.081e-7■■□□□ 14.2
CSTF2TQ9H0L4 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.78□□□□□ -1.321e-7■■□□□ 14.2
CSTF2TQ9H0L4 SEPT9-235ENST00000591020 582 ntTSL 410.32□□□□□ -0.768e-8■■□□□ 14.2
CSTF2TQ9H0L4 BCAR1-210ENST00000561970 594 ntTSL 427.51■■□□□ 1.991e-8■■□□□ 14.1
CSTF2TQ9H0L4 AC009078.3-201ENST00000624205 4084 ntBASIC10.84□□□□□ -0.675e-11■■□□□ 14.1
CSTF2TQ9H0L4 TFEB-208ENST00000416140 1022 ntTSL 518.34■□□□□ 0.531e-6■■□□□ 14.1
CSTF2TQ9H0L4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.324e-7■■□□□ 14.1
CSTF2TQ9H0L4 AAMDC-205ENST00000526164 726 ntTSL 214.83□□□□□ -0.044e-7■■□□□ 14.1
CSTF2TQ9H0L4 AAMDC-209ENST00000531855 458 ntTSL 414.66□□□□□ -0.064e-7■■□□□ 14.1
CSTF2TQ9H0L4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.144e-7■■□□□ 14.1
CSTF2TQ9H0L4 CBL-205ENST00000637974 3030 ntAPPRIS ALT2 TSL 512.29□□□□□ -0.444e-7■■□□□ 14.1
CSTF2TQ9H0L4 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC12.13□□□□□ -0.474e-7■■□□□ 14.1
CSTF2TQ9H0L4 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC11.7□□□□□ -0.544e-7■■□□□ 14.1
CSTF2TQ9H0L4 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.544e-7■■□□□ 14.1
CSTF2TQ9H0L4 CBL-203ENST00000634586 3457 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.674e-7■■□□□ 14.1
CSTF2TQ9H0L4 AAMDC-212ENST00000630098 542 ntTSL 5 BASIC10.07□□□□□ -0.84e-7■■□□□ 14.1
CSTF2TQ9H0L4 AAMDC-204ENST00000525409 421 ntTSL 3 BASIC10.07□□□□□ -0.84e-7■■□□□ 14.1
CSTF2TQ9H0L4 AAMDC-201ENST00000304716 619 ntTSL 1 (best) BASIC10.04□□□□□ -0.84e-7■■□□□ 14.1
CSTF2TQ9H0L4 KDM4A-201ENST00000372396 4474 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.874e-7■■□□□ 14.1
CSTF2TQ9H0L4 RHAG-201ENST00000229810 1283 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.894e-7■■□□□ 14.1
CSTF2TQ9H0L4 RHAG-203ENST00000618248 1203 ntTSL 5 BASIC9.26□□□□□ -0.934e-7■■□□□ 14.1
CSTF2TQ9H0L4 RHAG-202ENST00000371175 1912 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.954e-7■■□□□ 14.1
CSTF2TQ9H0L4 ZFAS1-209ENST00000620594 508 ntTSL 37.49□□□□□ -1.214e-7■■□□□ 14.1
CSTF2TQ9H0L4 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.244e-7■■□□□ 14.1
CSTF2TQ9H0L4 SYNGAP1-211ENST00000636116 161 ntTSL 57.11□□□□□ -1.274e-7■■□□□ 14.1
CSTF2TQ9H0L4 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.86□□□□□ -1.473e-6■■□□□ 14.1
CSTF2TQ9H0L4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.92□□□□□ -1.623e-6■■□□□ 14.1
CSTF2TQ9H0L4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.88□□□□□ -1.633e-6■■□□□ 14.1
CSTF2TQ9H0L4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.653e-6■■□□□ 14.1
CSTF2TQ9H0L4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.73e-6■■□□□ 14.1
CSTF2TQ9H0L4 SYNGAP1-220ENST00000637194 100 ntTSL 52.77□□□□□ -1.974e-7■■□□□ 14.1
CSTF2TQ9H0L4 RECQL5-206ENST00000578201 1972 ntTSL 513.52□□□□□ -0.255e-6■■□□□ 14.1
CSTF2TQ9H0L4 RECQL5-215ENST00000582464 656 ntTSL 312.55□□□□□ -0.45e-6■■□□□ 14.1
CSTF2TQ9H0L4 RECQL5-204ENST00000423245 3576 ntTSL 1 (best) BASIC11.34□□□□□ -0.595e-6■■□□□ 14.1
Retrieved 100 of 19,151 protein–RNA pairs in 170.4 ms