RNA–Protein interactions for RNA: ENST00000637194.1

SYNGAP1-220, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-220ENST00000637194 AEBP2Q6ZN18 517 aaPredicted RBP10.97□□□□□ -0.65
SYNGAP1-220ENST00000637194 CHIC1Q5VXU3 224 aa10.52□□□□□ -0.73
SYNGAP1-220ENST00000637194 SENP3Q9H4L4 574 aaPredicted RBP9.39□□□□□ -0.91
SYNGAP1-220ENST00000637194 PHF23Q9BUL5 403 aaPredicted RBP9.25□□□□□ -0.93
SYNGAP1-220ENST00000637194 FOXD1Q16676 465 aa8.72□□□□□ -1.01
SYNGAP1-220ENST00000637194 PLPPR3Q6T4P5 718 aa8.44□□□□□ -1.06
SYNGAP1-220ENST00000637194 MSH5O43196 834 aa8.17□□□□□ -1.1
SYNGAP1-220ENST00000637194 PPP6R1Q9UPN7 881 aa8.17□□□□□ -1.1
SYNGAP1-220ENST00000637194 ADRA2BP18089 450 aa8.15□□□□□ -1.1
SYNGAP1-220ENST00000637194 PIAS4Q8N2W9 510 aaPredicted RBP8.15□□□□□ -1.1
SYNGAP1-220ENST00000637194 POTEDQ86YR6 584 aa7.81□□□□□ -1.16
SYNGAP1-220ENST00000637194 SCAF1Q9H7N4 1312 aaKnown RBP7.52□□□□□ -1.2
SYNGAP1-220ENST00000637194 DMRT2Q9Y5R5 561 aa7.46□□□□□ -1.22
SYNGAP1-220ENST00000637194 MAPK8IP2Q13387 824 aaPredicted RBP7.45□□□□□ -1.22
SYNGAP1-220ENST00000637194 PPP4R3CPQ6ZMV5 832 aa7.39□□□□□ -1.23
SYNGAP1-220ENST00000637194 CNKSR2Q8WXI2 1034 aa7.26□□□□□ -1.25
SYNGAP1-220ENST00000637194 HOXD11P31277 338 aaPredicted RBP7.22□□□□□ -1.25
SYNGAP1-220ENST00000637194 RNF216Q9NWF9 866 aaPredicted RBP7.18□□□□□ -1.26
SYNGAP1-220ENST00000637194 NCBP3Q53F19 620 aaKnown RBP7.16□□□□□ -1.26
SYNGAP1-220ENST00000637194 DCAF8L1A6NGE4 600 aa7.08□□□□□ -1.28
SYNGAP1-220ENST00000637194 NPM3O75607 178 aaKnown RBP7.02□□□□□ -1.29
SYNGAP1-220ENST00000637194 DNAJC5BQ9UF47 199 aa7.01□□□□□ -1.29
SYNGAP1-220ENST00000637194 RNF39Q9H2S5 420 aa6.96□□□□□ -1.3
SYNGAP1-220ENST00000637194 KCNA4P22459 653 aa6.93□□□□□ -1.3
SYNGAP1-220ENST00000637194 CACNB1Q02641 598 aaPredicted RBP6.92□□□□□ -1.3
SYNGAP1-220ENST00000637194 C1QBPQ07021 282 aaKnown RBP6.88□□□□□ -1.31
SYNGAP1-220ENST00000637194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.84□□□□□ -1.31
SYNGAP1-220ENST00000637194 U3KPZ7 1027 aaPredicted RBP6.71□□□□□ -1.34
SYNGAP1-220ENST00000637194 SLC4A2P04920 1241 aa6.69□□□□□ -1.34
SYNGAP1-220ENST00000637194 APLP2Q06481 763 aa6.59□□□□□ -1.35
SYNGAP1-220ENST00000637194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.58□□□□□ -1.36
SYNGAP1-220ENST00000637194 HNRNPUL2Q1KMD3 747 aaKnown RBP6.58□□□□□ -1.36
SYNGAP1-220ENST00000637194 SLC4A1APQ9BWU0 796 aaKnown RBP6.57□□□□□ -1.36
SYNGAP1-220ENST00000637194 SPINK5Q9NQ38 1064 aaPredicted RBP6.57□□□□□ -1.36
SYNGAP1-220ENST00000637194 CAPN15O75808 1086 aa6.56□□□□□ -1.36
SYNGAP1-220ENST00000637194 SAMD1Q6SPF0 538 aaPredicted RBP6.55□□□□□ -1.36
SYNGAP1-220ENST00000637194 DSG3P32926 999 aa6.53□□□□□ -1.36
SYNGAP1-220ENST00000637194 MYCNP04198 464 aaPredicted RBP6.52□□□□□ -1.37
SYNGAP1-220ENST00000637194 ZNF219Q9P2Y4 722 aaPredicted RBP6.51□□□□□ -1.37
SYNGAP1-220ENST00000637194 FOXD4L1Q9NU39 408 aa6.48□□□□□ -1.37
SYNGAP1-220ENST00000637194 TRHP20396 242 aaPredicted RBP6.46□□□□□ -1.38
SYNGAP1-220ENST00000637194 ABCB7O75027 752 aa6.4□□□□□ -1.38
SYNGAP1-220ENST00000637194 ZBTB22O15209 634 aa6.37□□□□□ -1.39
SYNGAP1-220ENST00000637194 POLA2Q14181 598 aa6.32□□□□□ -1.4
SYNGAP1-220ENST00000637194 ATXN8OSP0DMR3 200 aa6.31□□□□□ -1.4
SYNGAP1-220ENST00000637194 ATF5Q9Y2D1 282 aaPredicted RBP6.31□□□□□ -1.4
SYNGAP1-220ENST00000637194 RBM42Q9BTD8 480 aaKnown RBP6.26□□□□□ -1.41
SYNGAP1-220ENST00000637194 ZBTB12Q9Y330 459 aaPredicted RBP6.26□□□□□ -1.41
SYNGAP1-220ENST00000637194 CSRNP3Q8WYN3 585 aa6.15□□□□□ -1.42
SYNGAP1-220ENST00000637194 POTEHQ6S545 545 aa6.13□□□□□ -1.43
SYNGAP1-220ENST00000637194 AKT1S1Q96B36 256 aa6.13□□□□□ -1.43
SYNGAP1-220ENST00000637194 FBLN2P98095 1184 aa6.11□□□□□ -1.43
SYNGAP1-220ENST00000637194 OSCARQ8IYS5 282 aa6.11□□□□□ -1.43
SYNGAP1-220ENST00000637194 SPDYE2BA6NHP3 402 aa6.06□□□□□ -1.44
SYNGAP1-220ENST00000637194 SPDYE6P0CI01 402 aa6.06□□□□□ -1.44
SYNGAP1-220ENST00000637194 SPDYE2Q495Y8 402 aa6.06□□□□□ -1.44
SYNGAP1-220ENST00000637194 CHRDL2Q6WN34 429 aa6.06□□□□□ -1.44
SYNGAP1-220ENST00000637194 EHMT2Q96KQ7 1210 aa6.06□□□□□ -1.44
SYNGAP1-220ENST00000637194 MKRN4PQ13434 485 aaPredicted RBP6.04□□□□□ -1.44
SYNGAP1-220ENST00000637194 REM2Q8IYK8 340 aaPredicted RBP6.04□□□□□ -1.44
SYNGAP1-220ENST00000637194 SSUH2Q9Y2M2 353 aa5.98□□□□□ -1.45
SYNGAP1-220ENST00000637194 PITPNM1O00562 1244 aa5.96□□□□□ -1.46
SYNGAP1-220ENST00000637194 ZNF692Q9BU19 519 aaPredicted RBP5.96□□□□□ -1.46
SYNGAP1-220ENST00000637194 FXR2P51116 673 aaKnown RBP eCLIP5.93□□□□□ -1.46
SYNGAP1-220ENST00000637194 PIP4P2Q8N4L2 257 aa5.92□□□□□ -1.46
SYNGAP1-220ENST00000637194 SPDYE1Q8NFV5 336 aaPredicted RBP5.92□□□□□ -1.46
SYNGAP1-220ENST00000637194 PABPN1Q86U42 306 aaKnown RBP eCLIP5.86□□□□□ -1.47
SYNGAP1-220ENST00000637194 CLEC11AQ9Y240 323 aa5.86□□□□□ -1.47
SYNGAP1-220ENST00000637194 PRKAR2AP13861 404 aaKnown RBP5.81□□□□□ -1.48
SYNGAP1-220ENST00000637194 SPDYE4A6NLX3 237 aa5.8□□□□□ -1.48
SYNGAP1-220ENST00000637194 PRR29P0C7W0 189 aa5.8□□□□□ -1.48
SYNGAP1-220ENST00000637194 HAX1O00165 279 aa5.79□□□□□ -1.48
SYNGAP1-220ENST00000637194 SP7Q8TDD2 431 aaPredicted RBP5.79□□□□□ -1.48
SYNGAP1-220ENST00000637194 STAG3Q9UJ98 1225 aa5.77□□□□□ -1.49
SYNGAP1-220ENST00000637194 C19orf67A6NJJ6 358 aa5.73□□□□□ -1.49
SYNGAP1-220ENST00000637194 CHADLQ6NUI6 762 aa5.73□□□□□ -1.49
SYNGAP1-220ENST00000637194 PROM2Q8N271 834 aa5.72□□□□□ -1.49
SYNGAP1-220ENST00000637194 EVX2Q03828 476 aa5.7□□□□□ -1.5
SYNGAP1-220ENST00000637194 FARP1Q9Y4F1 1045 aaPredicted RBP5.69□□□□□ -1.5
SYNGAP1-220ENST00000637194 CREBZFQ9NS37 354 aa5.68□□□□□ -1.5
SYNGAP1-220ENST00000637194 CD44P16070 742 aaKnown RBP5.64□□□□□ -1.51
SYNGAP1-220ENST00000637194 CLCN6P51797 869 aa5.63□□□□□ -1.51
SYNGAP1-220ENST00000637194 GABBR2O75899 941 aa5.61□□□□□ -1.51
SYNGAP1-220ENST00000637194 NPM1P06748 294 aaKnown RBP eCLIP5.6□□□□□ -1.51
SYNGAP1-220ENST00000637194 MNX1P50219 401 aaPredicted RBP5.59□□□□□ -1.51
SYNGAP1-220ENST00000637194 ZNF579Q8NAF0 562 aaKnown RBP5.58□□□□□ -1.52
SYNGAP1-220ENST00000637194 PAK3O75914 559 aaPredicted RBP5.56□□□□□ -1.52
SYNGAP1-220ENST00000637194 FKBP8Q14318 412 aa5.56□□□□□ -1.52
SYNGAP1-220ENST00000637194 ZRANB1Q9UGI0 708 aa5.56□□□□□ -1.52
SYNGAP1-220ENST00000637194 PLEKHG5O94827 1062 aa5.54□□□□□ -1.52
SYNGAP1-220ENST00000637194 MIER1Q8N108 512 aa5.51□□□□□ -1.53
SYNGAP1-220ENST00000637194 ZBTB47Q9UFB7 747 aaPredicted RBP5.49□□□□□ -1.53
SYNGAP1-220ENST00000637194 POTEIP0CG38 1075 aa5.48□□□□□ -1.53
SYNGAP1-220ENST00000637194 PLCD3Q8N3E9 789 aa5.48□□□□□ -1.53
SYNGAP1-220ENST00000637194 PHF12Q96QT6 1004 aa5.48□□□□□ -1.53
SYNGAP1-220ENST00000637194 FBXO3Q9UK99 471 aa5.48□□□□□ -1.53
SYNGAP1-220ENST00000637194 DCBLD2Q96PD2 775 aa5.47□□□□□ -1.53
SYNGAP1-220ENST00000637194 GALR2O43603 387 aaPredicted RBP5.46□□□□□ -1.54
SYNGAP1-220ENST00000637194 CCDC61Q9Y6R9 512 aa5.46□□□□□ -1.54
SYNGAP1-220ENST00000637194 TSPYL2Q9H2G4 693 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms