Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.99■■□□□ 1.11
RTL9Q8NET4 AL022326.1-202ENST00000641533 845 ntBASIC21.99■■□□□ 1.11
RTL9Q8NET4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.99■■□□□ 1.11
RTL9Q8NET4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.99■■□□□ 1.11
RTL9Q8NET4 AC104109.2-201ENST00000602919 1418 ntBASIC21.99■■□□□ 1.11
RTL9Q8NET4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.99■■□□□ 1.11
RTL9Q8NET4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTL9Q8NET4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTL9Q8NET4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTL9Q8NET4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTL9Q8NET4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTL9Q8NET4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTL9Q8NET4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTL9Q8NET4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RTL9Q8NET4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
RTL9Q8NET4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTL9Q8NET4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTL9Q8NET4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTL9Q8NET4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTL9Q8NET4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
RTL9Q8NET4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTL9Q8NET4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTL9Q8NET4 KRT18P27-201ENST00000427733 1299 ntBASIC21.99■■□□□ 1.11
RTL9Q8NET4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.99■■□□□ 1.11
RTL9Q8NET4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.99■■□□□ 1.11
RTL9Q8NET4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.99■■□□□ 1.11
RTL9Q8NET4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTL9Q8NET4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RTL9Q8NET4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.98■■□□□ 1.11
RTL9Q8NET4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RTL9Q8NET4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RTL9Q8NET4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 AC055717.3-201ENST00000622967 595 ntBASIC21.98■■□□□ 1.11
RTL9Q8NET4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTL9Q8NET4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTL9Q8NET4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.97■■□□□ 1.11
RTL9Q8NET4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTL9Q8NET4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTL9Q8NET4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.97■■□□□ 1.11
RTL9Q8NET4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTL9Q8NET4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTL9Q8NET4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
RTL9Q8NET4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTL9Q8NET4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTL9Q8NET4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTL9Q8NET4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.97■■□□□ 1.11
RTL9Q8NET4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTL9Q8NET4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RTL9Q8NET4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTL9Q8NET4 AL138781.2-201ENST00000617896 1843 ntBASIC21.97■■□□□ 1.11
RTL9Q8NET4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
RTL9Q8NET4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RTL9Q8NET4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RTL9Q8NET4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RTL9Q8NET4 AC005104.2-201ENST00000427818 678 ntBASIC21.97■■□□□ 1.11
RTL9Q8NET4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.97■■□□□ 1.11
RTL9Q8NET4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.97■■□□□ 1.11
RTL9Q8NET4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
RTL9Q8NET4 AC034105.1-201ENST00000563488 319 ntBASIC21.97■■□□□ 1.11
RTL9Q8NET4 AC140113.2-201ENST00000604370 208 ntBASIC21.97■■□□□ 1.11
RTL9Q8NET4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RTL9Q8NET4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTL9Q8NET4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.97■■□□□ 1.11
RTL9Q8NET4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.97■■□□□ 1.11
RTL9Q8NET4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTL9Q8NET4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTL9Q8NET4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTL9Q8NET4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTL9Q8NET4 AL049757.1-201ENST00000616842 1596 ntBASIC21.96■■□□□ 1.11
RTL9Q8NET4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.96■■□□□ 1.11
RTL9Q8NET4 AC098818.2-201ENST00000564925 2320 ntBASIC21.96■■□□□ 1.11
RTL9Q8NET4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTL9Q8NET4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTL9Q8NET4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTL9Q8NET4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTL9Q8NET4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTL9Q8NET4 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.96■■□□□ 1.11
RTL9Q8NET4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.96■■□□□ 1.11
RTL9Q8NET4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.96■■□□□ 1.11
RTL9Q8NET4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.96■■□□□ 1.11
RTL9Q8NET4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTL9Q8NET4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.96■■□□□ 1.11
RTL9Q8NET4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.96■■□□□ 1.11
RTL9Q8NET4 AC105339.3-201ENST00000560043 636 ntBASIC21.96■■□□□ 1.11
RTL9Q8NET4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms