Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.27■□□□□ 0.68
SMG8Q8ND04 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.27■□□□□ 0.68
SMG8Q8ND04 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.68
SMG8Q8ND04 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.27■□□□□ 0.68
SMG8Q8ND04 AL139288.1-201ENST00000623748 933 ntBASIC19.27■□□□□ 0.68
SMG8Q8ND04 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.27■□□□□ 0.68
SMG8Q8ND04 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMG8Q8ND04 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SMG8Q8ND04 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMG8Q8ND04 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMG8Q8ND04 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMG8Q8ND04 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMG8Q8ND04 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.27■□□□□ 0.67
SMG8Q8ND04 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.27■□□□□ 0.67
SMG8Q8ND04 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMG8Q8ND04 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
SMG8Q8ND04 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.27■□□□□ 0.67
SMG8Q8ND04 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMG8Q8ND04 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMG8Q8ND04 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMG8Q8ND04 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMG8Q8ND04 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMG8Q8ND04 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMG8Q8ND04 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 AC139887.3-201ENST00000568585 713 ntBASIC19.26■□□□□ 0.67
SMG8Q8ND04 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMG8Q8ND04 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMG8Q8ND04 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMG8Q8ND04 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMG8Q8ND04 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMG8Q8ND04 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMG8Q8ND04 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.26■□□□□ 0.67
SMG8Q8ND04 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMG8Q8ND04 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMG8Q8ND04 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMG8Q8ND04 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMG8Q8ND04 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMG8Q8ND04 REXO1L9P-201ENST00000604264 2108 ntBASIC19.25■□□□□ 0.67
SMG8Q8ND04 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMG8Q8ND04 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMG8Q8ND04 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMG8Q8ND04 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.25■□□□□ 0.67
SMG8Q8ND04 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.25■□□□□ 0.67
SMG8Q8ND04 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.25■□□□□ 0.67
SMG8Q8ND04 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
SMG8Q8ND04 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.25■□□□□ 0.67
SMG8Q8ND04 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMG8Q8ND04 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SMG8Q8ND04 AC116407.3-201ENST00000623905 1129 ntBASIC19.25■□□□□ 0.67
SMG8Q8ND04 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SMG8Q8ND04 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMG8Q8ND04 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SMG8Q8ND04 AC090164.3-201ENST00000610780 2143 ntBASIC19.25■□□□□ 0.67
SMG8Q8ND04 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SMG8Q8ND04 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.25■□□□□ 0.67
SMG8Q8ND04 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMG8Q8ND04 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.25■□□□□ 0.67
SMG8Q8ND04 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMG8Q8ND04 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMG8Q8ND04 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMG8Q8ND04 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMG8Q8ND04 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.24■□□□□ 0.67
SMG8Q8ND04 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.24■□□□□ 0.67
SMG8Q8ND04 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMG8Q8ND04 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SMG8Q8ND04 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMG8Q8ND04 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SMG8Q8ND04 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SMG8Q8ND04 AC093909.1-201ENST00000504731 1122 ntBASIC19.24■□□□□ 0.67
SMG8Q8ND04 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.24■□□□□ 0.67
SMG8Q8ND04 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMG8Q8ND04 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.24■□□□□ 0.67
SMG8Q8ND04 AC012640.2-201ENST00000561606 901 ntBASIC19.24■□□□□ 0.67
SMG8Q8ND04 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.24■□□□□ 0.67
SMG8Q8ND04 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.24■□□□□ 0.67
SMG8Q8ND04 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.24■□□□□ 0.67
SMG8Q8ND04 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMG8Q8ND04 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMG8Q8ND04 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SMG8Q8ND04 AC079776.2-201ENST00000641154 1609 ntBASIC19.24■□□□□ 0.67
SMG8Q8ND04 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMG8Q8ND04 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMG8Q8ND04 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.24■□□□□ 0.67
SMG8Q8ND04 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMG8Q8ND04 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms