Protein–RNA interactions for Protein: Q8N9B4

ANKRD42, Ankyrin repeat domain-containing protein 42, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD42Q8N9B4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 AC239809.2-201ENST00000415381 517 ntBASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 NIFKP9-201ENST00000419265 221 ntBASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 AC008040.2-201ENST00000461049 708 ntBASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 RPS2P4-201ENST00000476944 856 ntBASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 UNC93B5-201ENST00000530315 699 ntBASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 AC233263.1-201ENST00000578059 224 ntBASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 AC069544.1-201ENST00000609399 999 ntBASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 AL163051.1-201ENST00000569214 1512 ntBASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 GPAT2P1-201ENST00000444924 1672 ntBASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ANKRD42Q8N9B4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 AC133963.1-201ENST00000504166 1679 ntBASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ANKRD42Q8N9B4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 LINC01126-201ENST00000623515 1646 ntBASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 MIR149-201ENST00000384879 89 ntBASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ANKRD42Q8N9B4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms