Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC096633.1-201ENST00000422446 749 ntBASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 SLC25A6P5-201ENST00000435663 894 ntBASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 AC009533.2-201ENST00000543664 586 ntBASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 HCG11-201ENST00000411553 5696 ntBASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAM1L1Q8N609 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 CLEC4GP1-201ENST00000596555 870 ntBASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 AC099336.1-202ENST00000602961 463 ntBASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAM1L1Q8N609 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.71■□□□□ 0.42
TRAM1L1Q8N609 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 POM121L3P-201ENST00000419331 1163 ntBASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 PRELID1P1-202ENST00000567272 903 ntBASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 BNIP3P18-201ENST00000593976 575 ntBASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAM1L1Q8N609 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 DDX43P3-201ENST00000441064 443 ntBASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms