Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 AL356585.2-201ENST00000625078 2396 ntBASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 GFER-205ENST00000569451 517 ntTSL 5 BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 MIR2861-201ENST00000636310 90 ntBASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 AC092117.1-201ENST00000621230 3250 ntBASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
SMIM20Q8N5G0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 ANO7L1-203ENST00000602586 1720 ntBASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 MIR3665-201ENST00000578708 105 ntBASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 AC021231.2-201ENST00000594613 730 ntBASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SMIM20Q8N5G0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
SMIM20Q8N5G0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
SMIM20Q8N5G0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
SMIM20Q8N5G0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC11.15□□□□□ -0.63
SMIM20Q8N5G0 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
SMIM20Q8N5G0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SMIM20Q8N5G0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SMIM20Q8N5G0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
SMIM20Q8N5G0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SMIM20Q8N5G0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC11.15□□□□□ -0.63
SMIM20Q8N5G0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
SMIM20Q8N5G0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM20Q8N5G0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM20Q8N5G0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM20Q8N5G0 DNM1P41-201ENST00000623634 3350 ntBASIC11.14□□□□□ -0.63
SMIM20Q8N5G0 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMIM20Q8N5G0 AC145098.2-201ENST00000623593 3026 ntBASIC11.14□□□□□ -0.63
SMIM20Q8N5G0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms