Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF440Q8IYI8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 HBZP1-201ENST00000354915 429 ntBASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 IGHGP-201ENST00000390555 1178 ntBASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 AC092597.1-201ENST00000487352 616 ntBASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 AC004263.2-201ENST00000617183 678 ntBASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF440Q8IYI8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 AL359075.1-203ENST00000462729 1002 ntBASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 GPR32P1-201ENST00000601788 811 ntBASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF440Q8IYI8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 DDX43P3-201ENST00000441064 443 ntBASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 AC112907.2-201ENST00000448639 330 ntBASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 AC063952.2-201ENST00000498792 1227 ntBASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ZNF440Q8IYI8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF440Q8IYI8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF440Q8IYI8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF440Q8IYI8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ZNF440Q8IYI8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF440Q8IYI8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF440Q8IYI8 AC067852.2-201ENST00000590513 2313 ntBASIC16.4■□□□□ 0.22
ZNF440Q8IYI8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF440Q8IYI8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
ZNF440Q8IYI8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF440Q8IYI8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms