Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 OR6D1P-203ENST00000641209 4860 ntBASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RP1L1Q8IWN7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 AC007967.2-201ENST00000432613 625 ntBASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 RNA5SP416-201ENST00000516838 111 ntBASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 NKAPP1-205ENST00000585790 367 ntBASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 MIR1199-201ENST00000621445 119 ntBASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RP1L1Q8IWN7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 RCN1P2-201ENST00000398357 915 ntBASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RP1L1Q8IWN7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.21■□□□□ 0.18
RP1L1Q8IWN7 RFPL4AP1-201ENST00000530883 850 ntBASIC16.21■□□□□ 0.18
RP1L1Q8IWN7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.21■□□□□ 0.18
RP1L1Q8IWN7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RP1L1Q8IWN7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RP1L1Q8IWN7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RP1L1Q8IWN7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RP1L1Q8IWN7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RP1L1Q8IWN7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RP1L1Q8IWN7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RP1L1Q8IWN7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RP1L1Q8IWN7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RP1L1Q8IWN7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RP1L1Q8IWN7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.2■□□□□ 0.18
RP1L1Q8IWN7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms