Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HIST2H2AA3Q6FI13 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 AC132938.6-201ENST00000623828 1655 ntBASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 AL133373.2-201ENST00000623187 2828 ntBASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 AC068880.1-201ENST00000507289 2297 ntBASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 AP003733.1-201ENST00000491725 852 ntBASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2AA3Q6FI13 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 GNAS-203ENST00000306120 1878 ntBASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 RCN1P1-201ENST00000400413 996 ntBASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 TMPOP1-202ENST00000424642 1267 ntBASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 AC063952.2-201ENST00000498792 1227 ntBASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 RN7SL850P-201ENST00000579959 291 ntBASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 LINC00167-201ENST00000530583 1419 ntBASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 LINC01311-201ENST00000565162 1445 ntBASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms