Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 AL023875.1-201ENST00000640777 796 ntBASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFI1BQ5VTD9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 ESRRAP1-201ENST00000400596 1257 ntBASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 KRASP1-201ENST00000407852 552 ntBASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 HLA-A-209ENST00000638375 975 ntBASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 LINC02228-204ENST00000642115 2962 ntBASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFI1BQ5VTD9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 AL160286.2-201ENST00000567150 934 ntBASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFI1BQ5VTD9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms