Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-BQ31612 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-BQ31612 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-BQ31612 AL020989.1-201ENST00000422979 469 ntBASIC17.34■□□□□ 0.37
HLA-BQ31612 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-BQ31612 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.34■□□□□ 0.37
HLA-BQ31612 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-BQ31612 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.34■□□□□ 0.37
HLA-BQ31612 SNHG9-202ENST00000564014 471 ntBASIC17.34■□□□□ 0.37
HLA-BQ31612 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
HLA-BQ31612 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.34■□□□□ 0.37
HLA-BQ31612 KRT8P47-201ENST00000604727 1398 ntBASIC17.34■□□□□ 0.37
HLA-BQ31612 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.34■□□□□ 0.37
HLA-BQ31612 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-BQ31612 AC004706.3-202ENST00000621574 984 ntBASIC17.34■□□□□ 0.37
HLA-BQ31612 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.34■□□□□ 0.37
HLA-BQ31612 AC002310.6-201ENST00000624451 1377 ntBASIC17.34■□□□□ 0.37
HLA-BQ31612 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
HLA-BQ31612 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HLA-BQ31612 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-BQ31612 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-BQ31612 AC116562.4-201ENST00000641316 2276 ntBASIC17.33■□□□□ 0.37
HLA-BQ31612 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-BQ31612 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HLA-BQ31612 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.33■□□□□ 0.37
HLA-BQ31612 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
HLA-BQ31612 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HLA-BQ31612 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-BQ31612 COX5BP2-201ENST00000392354 334 ntBASIC17.33■□□□□ 0.36
HLA-BQ31612 METTL21AP1-201ENST00000438852 635 ntBASIC17.33■□□□□ 0.36
HLA-BQ31612 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-BQ31612 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.33■□□□□ 0.36
HLA-BQ31612 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-BQ31612 MIR4469-201ENST00000583919 79 ntBASIC17.33■□□□□ 0.36
HLA-BQ31612 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
HLA-BQ31612 AC092865.6-201ENST00000642101 219 ntBASIC17.33■□□□□ 0.36
HLA-BQ31612 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-BQ31612 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-BQ31612 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-BQ31612 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-BQ31612 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-BQ31612 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-BQ31612 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HLA-BQ31612 AC006504.4-201ENST00000592118 1568 ntBASIC17.32■□□□□ 0.36
HLA-BQ31612 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-BQ31612 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HLA-BQ31612 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HLA-BQ31612 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.32■□□□□ 0.36
HLA-BQ31612 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.32■□□□□ 0.36
HLA-BQ31612 YBX1P5-201ENST00000509441 847 ntBASIC17.32■□□□□ 0.36
HLA-BQ31612 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
HLA-BQ31612 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-BQ31612 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 SIRPAP1-201ENST00000448467 1770 ntBASIC17.32■□□□□ 0.36
HLA-BQ31612 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HLA-BQ31612 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HLA-BQ31612 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-BQ31612 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-BQ31612 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HLA-BQ31612 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-BQ31612 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-BQ31612 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-BQ31612 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-BQ31612 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-BQ31612 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-BQ31612 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-BQ31612 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-BQ31612 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.31■□□□□ 0.36
HLA-BQ31612 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-BQ31612 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HLA-BQ31612 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-BQ31612 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-BQ31612 ELK2BP-201ENST00000415014 1224 ntBASIC17.31■□□□□ 0.36
HLA-BQ31612 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-BQ31612 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-BQ31612 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.31■□□□□ 0.36
HLA-BQ31612 MIR4751-201ENST00000578027 74 ntBASIC17.31■□□□□ 0.36
HLA-BQ31612 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-BQ31612 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-BQ31612 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-BQ31612 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-BQ31612 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-BQ31612 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-BQ31612 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HLA-BQ31612 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms