Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RBM3P98179 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC11.33□□□□□ -0.6
RBM3P98179 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 CROCCP2-202ENST00000412962 2773 ntBASIC11.33□□□□□ -0.6
RBM3P98179 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC11.33□□□□□ -0.6
RBM3P98179 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 NME4-202ENST00000382940 766 ntTSL 3 BASIC11.33□□□□□ -0.6
RBM3P98179 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC11.33□□□□□ -0.6
RBM3P98179 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC11.33□□□□□ -0.6
RBM3P98179 TERF1P5-201ENST00000477545 1207 ntBASIC11.33□□□□□ -0.6
RBM3P98179 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC11.33□□□□□ -0.6
RBM3P98179 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC11.33□□□□□ -0.6
RBM3P98179 GRAMD4P4-201ENST00000613563 1115 ntBASIC11.33□□□□□ -0.6
RBM3P98179 NME4-211ENST00000620944 1193 ntTSL 2 BASIC11.33□□□□□ -0.6
RBM3P98179 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
RBM3P98179 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC11.33□□□□□ -0.6
RBM3P98179 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 ABR-203ENST00000536794 2213 ntTSL 2 BASIC11.33□□□□□ -0.6
RBM3P98179 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
RBM3P98179 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
RBM3P98179 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RBM3P98179 AL138688.1-201ENST00000624851 1594 ntBASIC11.33□□□□□ -0.6
RBM3P98179 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
RBM3P98179 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC11.32□□□□□ -0.6
RBM3P98179 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
RBM3P98179 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC11.32□□□□□ -0.6
RBM3P98179 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
RBM3P98179 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
RBM3P98179 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
RBM3P98179 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
RBM3P98179 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
RBM3P98179 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
RBM3P98179 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 YBX1P10-201ENST00000444752 975 ntBASIC11.32□□□□□ -0.6
RBM3P98179 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 TERF1P2-201ENST00000583350 1212 ntBASIC11.32□□□□□ -0.6
RBM3P98179 AC016405.3-201ENST00000607710 860 ntBASIC11.32□□□□□ -0.6
RBM3P98179 AC068587.9-201ENST00000641814 219 ntBASIC11.32□□□□□ -0.6
RBM3P98179 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
RBM3P98179 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC11.32□□□□□ -0.6
RBM3P98179 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
RBM3P98179 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.32□□□□□ -0.6
RBM3P98179 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC11.32□□□□□ -0.6
RBM3P98179 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
RBM3P98179 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
RBM3P98179 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RBM3P98179 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RBM3P98179 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC11.32□□□□□ -0.6
RBM3P98179 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RBM3P98179 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
RBM3P98179 AC092850.2-201ENST00000623821 2697 ntBASIC11.32□□□□□ -0.6
RBM3P98179 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RBM3P98179 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RBM3P98179 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RBM3P98179 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RBM3P98179 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RBM3P98179 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms