Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.97■□□□□ 0.31
GABRA4P48169 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.97■□□□□ 0.31
GABRA4P48169 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.97■□□□□ 0.31
GABRA4P48169 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 BICD1-207ENST00000551848 1962 ntBASIC16.97■□□□□ 0.31
GABRA4P48169 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.97■□□□□ 0.31
GABRA4P48169 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.97■□□□□ 0.31
GABRA4P48169 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.97■□□□□ 0.31
GABRA4P48169 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.97■□□□□ 0.31
GABRA4P48169 FAM220CP-201ENST00000395253 831 ntBASIC16.97■□□□□ 0.31
GABRA4P48169 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
GABRA4P48169 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.97■□□□□ 0.31
GABRA4P48169 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.97■□□□□ 0.31
GABRA4P48169 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.97■□□□□ 0.31
GABRA4P48169 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.97■□□□□ 0.31
GABRA4P48169 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.97■□□□□ 0.31
GABRA4P48169 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.97■□□□□ 0.31
GABRA4P48169 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
GABRA4P48169 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
GABRA4P48169 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
GABRA4P48169 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABRA4P48169 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.97■□□□□ 0.31
GABRA4P48169 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABRA4P48169 AP000997.3-201ENST00000623333 2250 ntBASIC16.96■□□□□ 0.31
GABRA4P48169 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.96■□□□□ 0.31
GABRA4P48169 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABRA4P48169 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABRA4P48169 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABRA4P48169 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABRA4P48169 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABRA4P48169 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABRA4P48169 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABRA4P48169 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.96■□□□□ 0.31
GABRA4P48169 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABRA4P48169 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.96■□□□□ 0.31
GABRA4P48169 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABRA4P48169 ABCD1P5-201ENST00000445663 754 ntBASIC16.96■□□□□ 0.31
GABRA4P48169 AC122714.2-201ENST00000502787 707 ntBASIC16.96■□□□□ 0.31
GABRA4P48169 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
GABRA4P48169 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.96■□□□□ 0.31
GABRA4P48169 SLC25A6P4-201ENST00000586535 553 ntBASIC16.96■□□□□ 0.31
GABRA4P48169 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
GABRA4P48169 AL355877.3-201ENST00000622820 899 ntBASIC16.96■□□□□ 0.31
GABRA4P48169 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
GABRA4P48169 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
GABRA4P48169 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.96■□□□□ 0.31
GABRA4P48169 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABRA4P48169 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABRA4P48169 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
GABRA4P48169 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
GABRA4P48169 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
GABRA4P48169 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
GABRA4P48169 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GABRA4P48169 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.96■□□□□ 0.3
GABRA4P48169 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GABRA4P48169 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GABRA4P48169 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.96■□□□□ 0.3
GABRA4P48169 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABRA4P48169 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABRA4P48169 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABRA4P48169 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABRA4P48169 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.95■□□□□ 0.3
GABRA4P48169 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABRA4P48169 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABRA4P48169 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.95■□□□□ 0.3
GABRA4P48169 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.95■□□□□ 0.3
GABRA4P48169 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABRA4P48169 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABRA4P48169 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
GABRA4P48169 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABRA4P48169 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.95■□□□□ 0.3
GABRA4P48169 RBM17P3-201ENST00000417687 1192 ntBASIC16.95■□□□□ 0.3
GABRA4P48169 FGFR3P6-201ENST00000457012 610 ntBASIC16.95■□□□□ 0.3
GABRA4P48169 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.95■□□□□ 0.3
GABRA4P48169 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.95■□□□□ 0.3
GABRA4P48169 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.95■□□□□ 0.3
GABRA4P48169 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.95■□□□□ 0.3
GABRA4P48169 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABRA4P48169 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABRA4P48169 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
GABRA4P48169 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABRA4P48169 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GABRA4P48169 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GABRA4P48169 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
GABRA4P48169 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
GABRA4P48169 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms