Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC6A12P48065 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC6A12P48065 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC6A12P48065 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 AC133963.1-201ENST00000504166 1679 ntBASIC17.3■□□□□ 0.36
SLC6A12P48065 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC6A12P48065 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC6A12P48065 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SLC6A12P48065 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC6A12P48065 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC6A12P48065 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC6A12P48065 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
SLC6A12P48065 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.3■□□□□ 0.36
SLC6A12P48065 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SLC6A12P48065 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC6A12P48065 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SLC6A12P48065 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC6A12P48065 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
SLC6A12P48065 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC6A12P48065 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC6A12P48065 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SLC6A12P48065 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SLC6A12P48065 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC6A12P48065 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SLC6A12P48065 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
SLC6A12P48065 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SLC6A12P48065 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.29■□□□□ 0.36
SLC6A12P48065 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC6A12P48065 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.29■□□□□ 0.36
SLC6A12P48065 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SLC6A12P48065 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC6A12P48065 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SLC6A12P48065 REXO1L11P-201ENST00000620964 1927 ntBASIC17.29■□□□□ 0.36
SLC6A12P48065 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC6A12P48065 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC6A12P48065 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLC6A12P48065 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC6A12P48065 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC6A12P48065 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC6A12P48065 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC6A12P48065 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 AL049597.2-201ENST00000565575 961 ntBASIC17.28■□□□□ 0.36
SLC6A12P48065 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC6A12P48065 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC6A12P48065 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC6A12P48065 AL121956.5-201ENST00000625261 221 ntBASIC17.28■□□□□ 0.36
SLC6A12P48065 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SLC6A12P48065 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC6A12P48065 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLC6A12P48065 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A12P48065 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLC6A12P48065 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms