Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC22.43■■□□□ 1.18
RFC4P35249 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RFC4P35249 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22.43■■□□□ 1.18
RFC4P35249 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC22.43■■□□□ 1.18
RFC4P35249 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC22.43■■□□□ 1.18
RFC4P35249 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC22.43■■□□□ 1.18
RFC4P35249 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC22.43■■□□□ 1.18
RFC4P35249 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RFC4P35249 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
RFC4P35249 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RFC4P35249 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RFC4P35249 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RFC4P35249 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RFC4P35249 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RFC4P35249 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
RFC4P35249 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC22.42■■□□□ 1.18
RFC4P35249 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RFC4P35249 ESPNP-201ENST00000270691 2015 ntBASIC22.42■■□□□ 1.18
RFC4P35249 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
RFC4P35249 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
RFC4P35249 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RFC4P35249 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RFC4P35249 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.42■■□□□ 1.18
RFC4P35249 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC22.42■■□□□ 1.18
RFC4P35249 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC22.42■■□□□ 1.18
RFC4P35249 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
RFC4P35249 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC22.42■■□□□ 1.18
RFC4P35249 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC22.42■■□□□ 1.18
RFC4P35249 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC22.42■■□□□ 1.18
RFC4P35249 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC22.42■■□□□ 1.18
RFC4P35249 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC22.42■■□□□ 1.18
RFC4P35249 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RFC4P35249 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RFC4P35249 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
RFC4P35249 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RFC4P35249 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RFC4P35249 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.42■■□□□ 1.18
RFC4P35249 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
RFC4P35249 AC005332.7-201ENST00000614046 2005 ntBASIC22.41■■□□□ 1.18
RFC4P35249 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.41■■□□□ 1.18
RFC4P35249 AL353593.2-201ENST00000602529 1483 ntBASIC22.41■■□□□ 1.18
RFC4P35249 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC22.41■■□□□ 1.18
RFC4P35249 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RFC4P35249 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFC4P35249 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.41■■□□□ 1.18
RFC4P35249 CCND1-203ENST00000536559 553 ntTSL 3 BASIC22.41■■□□□ 1.18
RFC4P35249 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC22.41■■□□□ 1.18
RFC4P35249 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC22.41■■□□□ 1.18
RFC4P35249 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFC4P35249 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFC4P35249 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFC4P35249 AC148477.5-201ENST00000625164 1645 ntBASIC22.41■■□□□ 1.18
RFC4P35249 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFC4P35249 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFC4P35249 AC132938.5-201ENST00000624980 1813 ntBASIC22.41■■□□□ 1.18
RFC4P35249 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
RFC4P35249 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.4■■□□□ 1.18
RFC4P35249 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RFC4P35249 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RFC4P35249 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC22.4■■□□□ 1.18
RFC4P35249 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
RFC4P35249 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
RFC4P35249 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC22.4■■□□□ 1.18
RFC4P35249 CD63-210ENST00000550776 870 ntTSL 5 BASIC22.4■■□□□ 1.18
RFC4P35249 AL031432.2-201ENST00000566714 459 ntBASIC22.4■■□□□ 1.18
RFC4P35249 AL928711.1-201ENST00000570165 459 ntBASIC22.4■■□□□ 1.18
RFC4P35249 AC011467.4-201ENST00000594891 528 ntBASIC22.4■■□□□ 1.18
RFC4P35249 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RFC4P35249 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RFC4P35249 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RFC4P35249 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RFC4P35249 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RFC4P35249 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RFC4P35249 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RFC4P35249 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RFC4P35249 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RFC4P35249 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RFC4P35249 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RFC4P35249 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RFC4P35249 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RFC4P35249 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RFC4P35249 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.39■■□□□ 1.17
RFC4P35249 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC22.39■■□□□ 1.17
RFC4P35249 WDR53-203ENST00000429115 683 ntTSL 2 BASIC22.39■■□□□ 1.17
RFC4P35249 CFL1-212ENST00000531413 636 ntTSL 3 BASIC22.39■■□□□ 1.17
RFC4P35249 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC22.39■■□□□ 1.17
RFC4P35249 AC027612.4-201ENST00000605371 583 ntBASIC22.39■■□□□ 1.17
RFC4P35249 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC22.39■■□□□ 1.17
RFC4P35249 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
RFC4P35249 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
RFC4P35249 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RFC4P35249 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RFC4P35249 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC22.39■■□□□ 1.17
RFC4P35249 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RFC4P35249 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RFC4P35249 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.39■■□□□ 1.17
RFC4P35249 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RFC4P35249 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
RFC4P35249 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC22.38■■□□□ 1.17
RFC4P35249 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms