Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP11P24347 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MMP11P24347 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MMP11P24347 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MMP11P24347 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP11P24347 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.05■□□□□ 0.32
MMP11P24347 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
MMP11P24347 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP11P24347 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP11P24347 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP11P24347 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP11P24347 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP11P24347 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.04■□□□□ 0.32
MMP11P24347 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP11P24347 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP11P24347 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.04■□□□□ 0.32
MMP11P24347 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.04■□□□□ 0.32
MMP11P24347 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.04■□□□□ 0.32
MMP11P24347 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP11P24347 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.04■□□□□ 0.32
MMP11P24347 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP11P24347 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
MMP11P24347 IFNL4P1-201ENST00000607083 540 ntBASIC17.04■□□□□ 0.32
MMP11P24347 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.04■□□□□ 0.32
MMP11P24347 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.04■□□□□ 0.32
MMP11P24347 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
MMP11P24347 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP11P24347 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP11P24347 LINC00167-201ENST00000530583 1419 ntBASIC17.04■□□□□ 0.32
MMP11P24347 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP11P24347 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
MMP11P24347 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP11P24347 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
MMP11P24347 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP11P24347 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
MMP11P24347 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP11P24347 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MMP11P24347 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP11P24347 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.03■□□□□ 0.32
MMP11P24347 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.03■□□□□ 0.32
MMP11P24347 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP11P24347 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.03■□□□□ 0.32
MMP11P24347 IGHV3-47-201ENST00000425060 335 ntBASIC17.03■□□□□ 0.32
MMP11P24347 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
MMP11P24347 KRT18P31-201ENST00000506277 1292 ntBASIC17.03■□□□□ 0.32
MMP11P24347 AC011840.4-201ENST00000578471 627 ntBASIC17.03■□□□□ 0.32
MMP11P24347 AL732292.2-201ENST00000609649 430 ntBASIC17.03■□□□□ 0.32
MMP11P24347 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.03■□□□□ 0.32
MMP11P24347 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP11P24347 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP11P24347 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP11P24347 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MMP11P24347 LTB4R2-202ENST00000528054 3092 ntBASIC17.03■□□□□ 0.32
MMP11P24347 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
MMP11P24347 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP11P24347 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.03■□□□□ 0.32
MMP11P24347 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP11P24347 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP11P24347 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP11P24347 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP11P24347 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
MMP11P24347 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MMP11P24347 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP11P24347 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
MMP11P24347 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP11P24347 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
MMP11P24347 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MMP11P24347 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP11P24347 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.02■□□□□ 0.32
MMP11P24347 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP11P24347 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
MMP11P24347 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.02■□□□□ 0.32
MMP11P24347 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP11P24347 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP11P24347 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.02■□□□□ 0.32
MMP11P24347 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
MMP11P24347 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
MMP11P24347 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP11P24347 AL845331.1-201ENST00000424978 1190 ntBASIC17.02■□□□□ 0.32
MMP11P24347 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.02■□□□□ 0.32
MMP11P24347 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.02■□□□□ 0.32
MMP11P24347 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms