Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.03■□□□□ 0.48
THRAP10827 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
THRAP10827 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THRAP10827 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THRAP10827 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
THRAP10827 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.03■□□□□ 0.48
THRAP10827 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.02■□□□□ 0.48
THRAP10827 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THRAP10827 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THRAP10827 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
THRAP10827 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
THRAP10827 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THRAP10827 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.02■□□□□ 0.48
THRAP10827 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.02■□□□□ 0.48
THRAP10827 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
THRAP10827 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.02■□□□□ 0.48
THRAP10827 AC092597.1-201ENST00000487352 616 ntBASIC18.02■□□□□ 0.48
THRAP10827 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THRAP10827 KRT126P-201ENST00000549467 1181 ntBASIC18.02■□□□□ 0.48
THRAP10827 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.02■□□□□ 0.48
THRAP10827 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.02■□□□□ 0.48
THRAP10827 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
THRAP10827 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
THRAP10827 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
THRAP10827 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
THRAP10827 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
THRAP10827 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
THRAP10827 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.01■□□□□ 0.47
THRAP10827 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.01■□□□□ 0.47
THRAP10827 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.01■□□□□ 0.47
THRAP10827 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
THRAP10827 AL645929.1-201ENST00000420084 975 ntBASIC18.01■□□□□ 0.47
THRAP10827 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.01■□□□□ 0.47
THRAP10827 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.01■□□□□ 0.47
THRAP10827 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.01■□□□□ 0.47
THRAP10827 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.01■□□□□ 0.47
THRAP10827 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.01■□□□□ 0.47
THRAP10827 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
THRAP10827 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
THRAP10827 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
THRAP10827 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
THRAP10827 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.01■□□□□ 0.47
THRAP10827 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
THRAP10827 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18■□□□□ 0.47
THRAP10827 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18■□□□□ 0.47
THRAP10827 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
THRAP10827 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
THRAP10827 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18■□□□□ 0.47
THRAP10827 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
THRAP10827 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
THRAP10827 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18■□□□□ 0.47
THRAP10827 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
THRAP10827 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18■□□□□ 0.47
THRAP10827 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18■□□□□ 0.47
THRAP10827 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
THRAP10827 SEC1P-202ENST00000473944 940 ntBASIC18■□□□□ 0.47
THRAP10827 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18■□□□□ 0.47
THRAP10827 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18■□□□□ 0.47
THRAP10827 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18■□□□□ 0.47
THRAP10827 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18■□□□□ 0.47
THRAP10827 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
THRAP10827 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18■□□□□ 0.47
THRAP10827 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18■□□□□ 0.47
THRAP10827 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18■□□□□ 0.47
THRAP10827 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
THRAP10827 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
THRAP10827 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
THRAP10827 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
THRAP10827 PKD1P1-201ENST00000458669 6805 ntBASIC18■□□□□ 0.47
THRAP10827 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
THRAP10827 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18■□□□□ 0.47
THRAP10827 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THRAP10827 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms