Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MT-ND3P03897 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.31■□□□□ 0.52
MT-ND3P03897 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.31■□□□□ 0.52
MT-ND3P03897 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.31■□□□□ 0.52
MT-ND3P03897 AL512604.3-201ENST00000569583 964 ntBASIC18.31■□□□□ 0.52
MT-ND3P03897 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.31■□□□□ 0.52
MT-ND3P03897 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 GPAT2P1-201ENST00000444924 1672 ntBASIC18.31■□□□□ 0.52
MT-ND3P03897 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.31■□□□□ 0.52
MT-ND3P03897 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
MT-ND3P03897 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MT-ND3P03897 PCDHA12-202ENST00000613593 2588 ntBASIC18.31■□□□□ 0.52
MT-ND3P03897 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.31■□□□□ 0.52
MT-ND3P03897 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MT-ND3P03897 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MT-ND3P03897 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND3P03897 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND3P03897 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND3P03897 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
MT-ND3P03897 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND3P03897 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND3P03897 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.3■□□□□ 0.52
MT-ND3P03897 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND3P03897 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND3P03897 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
MT-ND3P03897 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND3P03897 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND3P03897 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
MT-ND3P03897 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
MT-ND3P03897 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND3P03897 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.3■□□□□ 0.52
MT-ND3P03897 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.3■□□□□ 0.52
MT-ND3P03897 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.3■□□□□ 0.52
MT-ND3P03897 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.3■□□□□ 0.52
MT-ND3P03897 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.3■□□□□ 0.52
MT-ND3P03897 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND3P03897 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND3P03897 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MT-ND3P03897 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
MT-ND3P03897 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
MT-ND3P03897 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
MT-ND3P03897 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MT-ND3P03897 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.3■□□□□ 0.52
MT-ND3P03897 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.3■□□□□ 0.52
MT-ND3P03897 OR6D1P-203ENST00000641209 4860 ntBASIC18.29■□□□□ 0.52
MT-ND3P03897 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
MT-ND3P03897 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
MT-ND3P03897 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND3P03897 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND3P03897 AC141586.5-201ENST00000624546 2050 ntBASIC18.29■□□□□ 0.52
MT-ND3P03897 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
MT-ND3P03897 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND3P03897 SDHAP2-201ENST00000455183 2001 ntBASIC18.29■□□□□ 0.52
MT-ND3P03897 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND3P03897 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND3P03897 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.29■□□□□ 0.52
MT-ND3P03897 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.29■□□□□ 0.52
MT-ND3P03897 AC104076.2-201ENST00000448912 469 ntBASIC18.29■□□□□ 0.52
MT-ND3P03897 TSPY17P-201ENST00000450329 467 ntBASIC18.29■□□□□ 0.52
MT-ND3P03897 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.29■□□□□ 0.52
MT-ND3P03897 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.29■□□□□ 0.52
MT-ND3P03897 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.29■□□□□ 0.52
MT-ND3P03897 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.29■□□□□ 0.52
MT-ND3P03897 FAM87A-204ENST00000613235 858 ntBASIC18.29■□□□□ 0.52
MT-ND3P03897 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND3P03897 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
MT-ND3P03897 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND3P03897 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND3P03897 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.29■□□□□ 0.52
MT-ND3P03897 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND3P03897 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.29■□□□□ 0.52
MT-ND3P03897 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.29■□□□□ 0.52
MT-ND3P03897 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
MT-ND3P03897 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
MT-ND3P03897 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND3P03897 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
MT-ND3P03897 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MT-ND3P03897 PP12613-201ENST00000424958 2230 ntBASIC18.29■□□□□ 0.52
MT-ND3P03897 AL163051.1-201ENST00000569214 1512 ntBASIC18.28■□□□□ 0.52
MT-ND3P03897 KRT18P55-202ENST00000578578 1546 ntBASIC18.28■□□□□ 0.52
MT-ND3P03897 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.28■□□□□ 0.52
MT-ND3P03897 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MT-ND3P03897 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND3P03897 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND3P03897 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.28■□□□□ 0.52
MT-ND3P03897 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND3P03897 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms