Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.05■□□□□ -0
SIX6O95475 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.05■□□□□ -0
SIX6O95475 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.05■□□□□ -0
SIX6O95475 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.05■□□□□ -0
SIX6O95475 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.05■□□□□ -0
SIX6O95475 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.05■□□□□ -0
SIX6O95475 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
SIX6O95475 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SIX6O95475 NTF6G-201ENST00000591094 616 ntBASIC15.05■□□□□ -0
SIX6O95475 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.05■□□□□ -0
SIX6O95475 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SIX6O95475 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
SIX6O95475 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.05■□□□□ -0
SIX6O95475 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SIX6O95475 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SIX6O95475 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.05■□□□□ -0
SIX6O95475 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.05■□□□□ -0
SIX6O95475 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.05■□□□□ -0
SIX6O95475 PCDHB17P-201ENST00000539533 2393 ntBASIC15.05■□□□□ -0
SIX6O95475 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SIX6O95475 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.05■□□□□ -0
SIX6O95475 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SIX6O95475 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SIX6O95475 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SIX6O95475 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.04■□□□□ -0
SIX6O95475 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
SIX6O95475 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.04■□□□□ -0
SIX6O95475 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.04■□□□□ -0
SIX6O95475 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.04■□□□□ -0
SIX6O95475 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 AL512625.2-201ENST00000417533 625 ntBASIC15.04■□□□□ -0
SIX6O95475 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.04■□□□□ -0
SIX6O95475 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.04■□□□□ -0
SIX6O95475 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.04■□□□□ -0
SIX6O95475 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.04■□□□□ -0
SIX6O95475 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.04■□□□□ -0
SIX6O95475 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.04■□□□□ -0
SIX6O95475 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.04■□□□□ -0
SIX6O95475 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.04■□□□□ -0
SIX6O95475 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SIX6O95475 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
SIX6O95475 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SIX6O95475 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.04■□□□□ -0
SIX6O95475 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.03■□□□□ -0
SIX6O95475 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.03■□□□□ -0
SIX6O95475 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SIX6O95475 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIX6O95475 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SIX6O95475 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIX6O95475 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SIX6O95475 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.03■□□□□ -0
SIX6O95475 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIX6O95475 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.03■□□□□ -0
SIX6O95475 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.03■□□□□ -0
SIX6O95475 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.03■□□□□ -0
SIX6O95475 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIX6O95475 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SIX6O95475 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.03■□□□□ -0
SIX6O95475 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.03■□□□□ -0
SIX6O95475 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIX6O95475 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
SIX6O95475 AC137761.2-201ENST00000561729 223 ntBASIC15.03■□□□□ -0
SIX6O95475 AC145350.3-201ENST00000569033 163 ntBASIC15.03■□□□□ -0
SIX6O95475 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.03■□□□□ -0
SIX6O95475 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.03■□□□□ -0
SIX6O95475 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIX6O95475 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIX6O95475 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIX6O95475 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SIX6O95475 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SIX6O95475 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIX6O95475 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SIX6O95475 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.02■□□□□ -0
SIX6O95475 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.02■□□□□ -0
SIX6O95475 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.02■□□□□ -0
SIX6O95475 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.02■□□□□ -0
SIX6O95475 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.02■□□□□ -0
SIX6O95475 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
SIX6O95475 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.02■□□□□ -0
SIX6O95475 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.02■□□□□ -0
SIX6O95475 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SIX6O95475 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms