Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.08■□□□□ 0.48
TRIM38O00635 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.08■□□□□ 0.48
TRIM38O00635 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM38O00635 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM38O00635 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM38O00635 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
TRIM38O00635 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM38O00635 ESPNP-201ENST00000270691 2015 ntBASIC18.08■□□□□ 0.48
TRIM38O00635 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRIM38O00635 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TRIM38O00635 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM38O00635 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM38O00635 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM38O00635 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM38O00635 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM38O00635 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM38O00635 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRIM38O00635 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM38O00635 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM38O00635 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM38O00635 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM38O00635 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM38O00635 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRIM38O00635 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM38O00635 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.07■□□□□ 0.48
TRIM38O00635 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM38O00635 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.07■□□□□ 0.48
TRIM38O00635 AC012615.1-201ENST00000565797 1299 ntBASIC18.07■□□□□ 0.48
TRIM38O00635 AL031008.1-201ENST00000619963 541 ntBASIC18.07■□□□□ 0.48
TRIM38O00635 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM38O00635 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM38O00635 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM38O00635 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRIM38O00635 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM38O00635 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM38O00635 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM38O00635 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM38O00635 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TRIM38O00635 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM38O00635 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM38O00635 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM38O00635 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM38O00635 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM38O00635 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM38O00635 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM38O00635 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRIM38O00635 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 KRT18P31-201ENST00000506277 1292 ntBASIC18.06■□□□□ 0.48
TRIM38O00635 AC090616.6-201ENST00000582640 721 ntBASIC18.06■□□□□ 0.48
TRIM38O00635 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.06■□□□□ 0.48
TRIM38O00635 AC104692.2-201ENST00000603054 253 ntBASIC18.06■□□□□ 0.48
TRIM38O00635 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM38O00635 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM38O00635 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM38O00635 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM38O00635 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM38O00635 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM38O00635 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM38O00635 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM38O00635 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM38O00635 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM38O00635 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM38O00635 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM38O00635 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM38O00635 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TRIM38O00635 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM38O00635 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM38O00635 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM38O00635 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM38O00635 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM38O00635 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM38O00635 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.05■□□□□ 0.48
TRIM38O00635 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM38O00635 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM38O00635 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM38O00635 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM38O00635 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM38O00635 IGHV3-41-201ENST00000613121 348 ntBASIC18.05■□□□□ 0.48
TRIM38O00635 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM38O00635 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM38O00635 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM38O00635 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM38O00635 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms