Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 FSCN1P1-201ENST00000568912 1481 ntBASIC19.47■□□□□ 0.71
CCDC66A2RUB6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC66A2RUB6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 AP000692.2-201ENST00000608391 879 ntBASIC19.46■□□□□ 0.71
CCDC66A2RUB6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCDC66A2RUB6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 NFIC-211ENST00000641145 8399 ntBASIC19.45■□□□□ 0.7
CCDC66A2RUB6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 ITM2C-210ENST00000620962 501 ntBASIC19.45■□□□□ 0.7
CCDC66A2RUB6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC66A2RUB6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC66A2RUB6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.43■□□□□ 0.7
CCDC66A2RUB6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms