Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 AC092068.3-201ENST00000587894 2016 ntBASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 AC018553.1-201ENST00000616682 1458 ntBASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 AL355312.1-201ENST00000407115 2176 ntBASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 AC091799.1-201ENST00000422823 811 ntBASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 SLC47A1P1-202ENST00000449666 945 ntBASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 AC105265.2-201ENST00000467189 838 ntBASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 CDV3P1-201ENST00000471403 739 ntBASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 AC009299.2-201ENST00000482477 511 ntBASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRBV20-1A0A075B6N2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC11.96□□□□□ -0.49
TRBV20-1A0A075B6N2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRBV20-1A0A075B6N2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRBV20-1A0A075B6N2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRBV20-1A0A075B6N2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRBV20-1A0A075B6N2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms