Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 CHCHD2P8-201ENST00000429873 447 ntBASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 NPAP1P7-201ENST00000613027 823 ntBASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 AC004870.1-201ENST00000315132 882 ntBASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 KRT17P6-201ENST00000453795 1220 ntBASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 RN7SL606P-201ENST00000472779 293 ntBASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 AC068472.1-201ENST00000474589 881 ntBASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 AL592071.1-201ENST00000611956 408 ntBASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 AC124864.1-201ENST00000623408 392 ntBASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 AC022898.2-201ENST00000616822 1312 ntBASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 AC007613.1-201ENST00000572811 2597 ntBASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAI2Q9Y5P3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RAI2Q9Y5P3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI2Q9Y5P3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms