Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA6Q9Y5G7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDHGA6Q9Y5G7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA6Q9Y5G7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PCDHGA6Q9Y5G7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA6Q9Y5G7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA6Q9Y5G7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 AC104819.1-201ENST00000504587 486 ntBASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 KRT18P31-201ENST00000506277 1292 ntBASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 AC024563.2-201ENST00000603282 481 ntBASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 AL732292.2-201ENST00000609649 430 ntBASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA6Q9Y5G7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 FOSL1P1-201ENST00000511041 816 ntBASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 Z69720.1-201ENST00000601483 472 ntBASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA6Q9Y5G7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 AC233702.3-201ENST00000578656 1387 ntBASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 EMBP1-201ENST00000458200 901 ntBASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA6Q9Y5G7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms