Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF6Q9Y252 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF6Q9Y252 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.95■□□□□ 0.3
RNF6Q9Y252 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF6Q9Y252 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF6Q9Y252 KRT18P38-201ENST00000449496 1282 ntBASIC16.95■□□□□ 0.3
RNF6Q9Y252 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
RNF6Q9Y252 PRSS44-201ENST00000515154 1146 ntBASIC16.95■□□□□ 0.3
RNF6Q9Y252 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF6Q9Y252 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF6Q9Y252 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.95■□□□□ 0.3
RNF6Q9Y252 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF6Q9Y252 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
RNF6Q9Y252 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.95■□□□□ 0.3
RNF6Q9Y252 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF6Q9Y252 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF6Q9Y252 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RNF6Q9Y252 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RNF6Q9Y252 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF6Q9Y252 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF6Q9Y252 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF6Q9Y252 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF6Q9Y252 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF6Q9Y252 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF6Q9Y252 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF6Q9Y252 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RNF6Q9Y252 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF6Q9Y252 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RNF6Q9Y252 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF6Q9Y252 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RNF6Q9Y252 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RNF6Q9Y252 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
RNF6Q9Y252 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.94■□□□□ 0.3
RNF6Q9Y252 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF6Q9Y252 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RNF6Q9Y252 AC080080.1-201ENST00000625121 2420 ntBASIC16.94■□□□□ 0.3
RNF6Q9Y252 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF6Q9Y252 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF6Q9Y252 AP000523.1-201ENST00000398242 1049 ntBASIC16.94■□□□□ 0.3
RNF6Q9Y252 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF6Q9Y252 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF6Q9Y252 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.94■□□□□ 0.3
RNF6Q9Y252 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF6Q9Y252 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF6Q9Y252 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF6Q9Y252 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF6Q9Y252 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF6Q9Y252 AC008556.1-201ENST00000610908 2040 ntBASIC16.94■□□□□ 0.3
RNF6Q9Y252 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF6Q9Y252 AC005332.1-201ENST00000577698 1310 ntBASIC16.94■□□□□ 0.3
RNF6Q9Y252 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF6Q9Y252 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF6Q9Y252 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF6Q9Y252 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RNF6Q9Y252 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
RNF6Q9Y252 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF6Q9Y252 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RNF6Q9Y252 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF6Q9Y252 KRT18P48-201ENST00000434763 852 ntBASIC16.93■□□□□ 0.3
RNF6Q9Y252 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.93■□□□□ 0.3
RNF6Q9Y252 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF6Q9Y252 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RNF6Q9Y252 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RNF6Q9Y252 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF6Q9Y252 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF6Q9Y252 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF6Q9Y252 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF6Q9Y252 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF6Q9Y252 KRT8P32-201ENST00000512863 1461 ntBASIC16.93■□□□□ 0.3
RNF6Q9Y252 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
RNF6Q9Y252 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF6Q9Y252 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RNF6Q9Y252 TNRC18P3-201ENST00000441896 2691 ntBASIC16.92■□□□□ 0.3
RNF6Q9Y252 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.92■□□□□ 0.3
RNF6Q9Y252 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms