Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB4Q9UN71 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB4Q9UN71 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB4Q9UN71 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB4Q9UN71 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGB4Q9UN71 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGB4Q9UN71 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGB4Q9UN71 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PCDHGB4Q9UN71 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGB4Q9UN71 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGB4Q9UN71 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGB4Q9UN71 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGB4Q9UN71 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 MIR3180-5-201ENST00000583743 153 ntBASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 AC113410.3-201ENST00000623366 203 ntBASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 GMCL1P1-201ENST00000463439 1581 ntBASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB4Q9UN71 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 GCSHP5-201ENST00000443090 522 ntBASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 REXO1L10P-201ENST00000615707 1290 ntBASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 REXO1L12P-201ENST00000622156 912 ntBASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 AC138028.4-201ENST00000564984 1845 ntBASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGB4Q9UN71 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 AC026471.5-201ENST00000615068 467 ntBASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGB4Q9UN71 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms