Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 REXO1L6P-202ENST00000619970 1078 ntBASIC16.88■□□□□ 0.29
CTSFQ9UBX1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 AC104581.1-202ENST00000635932 2618 ntBASIC16.88■□□□□ 0.29
CTSFQ9UBX1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 SAPCD2P3-201ENST00000455031 850 ntBASIC16.87■□□□□ 0.29
CTSFQ9UBX1 AC009078.2-202ENST00000463353 338 ntBASIC16.87■□□□□ 0.29
CTSFQ9UBX1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSFQ9UBX1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 AC009533.2-201ENST00000543664 586 ntBASIC16.86■□□□□ 0.29
CTSFQ9UBX1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 AC104692.2-201ENST00000603054 253 ntBASIC16.86■□□□□ 0.29
CTSFQ9UBX1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 KRT8P10-201ENST00000450021 1447 ntBASIC16.86■□□□□ 0.29
CTSFQ9UBX1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSFQ9UBX1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms