Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 AC005332.3-201ENST00000589904 676 ntBASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 GPR32P1-201ENST00000601788 811 ntBASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.73■□□□□ 0.59
PPARGC1AQ9UBK2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 ABALON-201ENST00000629058 1903 ntBASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 IER3-202ENST00000376377 1350 ntBASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 RNF126P1-202ENST00000569893 925 ntBASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 AC011498.5-201ENST00000592027 486 ntBASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 AL390719.2-201ENST00000606993 987 ntBASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 AC091076.1-201ENST00000610741 619 ntBASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 AP000550.4-202ENST00000639755 178 ntBASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPARGC1AQ9UBK2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 AC135776.1-201ENST00000319817 2481 ntBASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 AL358472.4-201ENST00000633140 710 ntBASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
PPARGC1AQ9UBK2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
PPARGC1AQ9UBK2 AC093010.1-201ENST00000473625 1624 ntBASIC18.71■□□□□ 0.58
PPARGC1AQ9UBK2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PPARGC1AQ9UBK2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms