Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00474Q9P2X8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 PVRIG2P-201ENST00000435460 978 ntBASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 AC139887.4-201ENST00000607877 719 ntBASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 PRORSD1P-202ENST00000563365 2154 ntBASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00474Q9P2X8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 RASA4DP-201ENST00000460726 1199 ntBASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 WIZP1-201ENST00000531444 2299 ntBASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms