Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 MINOS1P3-201ENST00000457048 203 ntBASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 AC138894.3-201ENST00000603787 634 ntBASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.29■□□□□ 0.36
SPHK1Q9NYA1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 NUS1P1-201ENST00000446295 882 ntBASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 BNIP3P18-201ENST00000593976 575 ntBASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.28■□□□□ 0.36
SPHK1Q9NYA1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 AC022898.2-201ENST00000616822 1312 ntBASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 AC138028.4-201ENST00000564984 1845 ntBASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms