Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 LINC00304-203ENST00000565008 1864 ntBASIC17.92■□□□□ 0.46
TREX1Q9NSU2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TREX1Q9NSU2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 AC133963.1-201ENST00000504166 1679 ntBASIC17.91■□□□□ 0.46
TREX1Q9NSU2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 AC112698.1-201ENST00000510299 916 ntBASIC17.91■□□□□ 0.46
TREX1Q9NSU2 AC022616.7-201ENST00000525383 220 ntBASIC17.91■□□□□ 0.46
TREX1Q9NSU2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 AL390719.2-201ENST00000606993 987 ntBASIC17.91■□□□□ 0.46
TREX1Q9NSU2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.91■□□□□ 0.46
TREX1Q9NSU2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TREX1Q9NSU2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 DDX43P3-201ENST00000441064 443 ntBASIC17.9■□□□□ 0.46
TREX1Q9NSU2 DUX4L26-201ENST00000489078 1255 ntBASIC17.9■□□□□ 0.46
TREX1Q9NSU2 RNF126P1-202ENST00000569893 925 ntBASIC17.9■□□□□ 0.46
TREX1Q9NSU2 AC005332.3-201ENST00000589904 676 ntBASIC17.9■□□□□ 0.46
TREX1Q9NSU2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.9■□□□□ 0.46
TREX1Q9NSU2 REXO1L11P-201ENST00000620964 1927 ntBASIC17.9■□□□□ 0.46
TREX1Q9NSU2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TREX1Q9NSU2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TREX1Q9NSU2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TREX1Q9NSU2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.89■□□□□ 0.46
TREX1Q9NSU2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.89■□□□□ 0.45
TREX1Q9NSU2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TREX1Q9NSU2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TREX1Q9NSU2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TREX1Q9NSU2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.88■□□□□ 0.45
TREX1Q9NSU2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms