Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
C12orf4Q9NQ89 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C12orf4Q9NQ89 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C12orf4Q9NQ89 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.67■□□□□ 0.1
C12orf4Q9NQ89 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.67■□□□□ 0.1
C12orf4Q9NQ89 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C12orf4Q9NQ89 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C12orf4Q9NQ89 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
C12orf4Q9NQ89 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C12orf4Q9NQ89 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C12orf4Q9NQ89 LINC00896-202ENST00000609602 2128 ntBASIC15.67■□□□□ 0.1
C12orf4Q9NQ89 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C12orf4Q9NQ89 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C12orf4Q9NQ89 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
C12orf4Q9NQ89 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.67■□□□□ 0.1
C12orf4Q9NQ89 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 AP002982.1-201ENST00000492365 877 ntBASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 AC124016.1-201ENST00000609552 612 ntBASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.66■□□□□ 0.1
C12orf4Q9NQ89 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 RCC2P3-201ENST00000418112 1537 ntBASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 AC133681.1-201ENST00000465482 601 ntBASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 AC090192.1-201ENST00000517740 490 ntBASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 AL353708.3-201ENST00000610272 989 ntBASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 AC110285.5-201ENST00000611501 352 ntBASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
C12orf4Q9NQ89 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
C12orf4Q9NQ89 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C12orf4Q9NQ89 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.64■□□□□ 0.09
C12orf4Q9NQ89 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C12orf4Q9NQ89 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C12orf4Q9NQ89 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
C12orf4Q9NQ89 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C12orf4Q9NQ89 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.64■□□□□ 0.09
C12orf4Q9NQ89 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
C12orf4Q9NQ89 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C12orf4Q9NQ89 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C12orf4Q9NQ89 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms