Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.98■□□□□ 0.47
CPNE1Q99829 MIR4497-201ENST00000583208 89 ntBASIC17.98■□□□□ 0.47
CPNE1Q99829 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CPNE1Q99829 AL138688.1-201ENST00000624851 1594 ntBASIC17.98■□□□□ 0.47
CPNE1Q99829 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE1Q99829 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CPNE1Q99829 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.98■□□□□ 0.47
CPNE1Q99829 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE1Q99829 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE1Q99829 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE1Q99829 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE1Q99829 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CPNE1Q99829 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CPNE1Q99829 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.98■□□□□ 0.47
CPNE1Q99829 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE1Q99829 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE1Q99829 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE1Q99829 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE1Q99829 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 MMP23A-201ENST00000234610 1017 ntBASIC17.97■□□□□ 0.47
CPNE1Q99829 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE1Q99829 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CPNE1Q99829 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CPNE1Q99829 AP000523.1-201ENST00000398242 1049 ntBASIC17.97■□□□□ 0.47
CPNE1Q99829 TSPY15P-201ENST00000457163 923 ntBASIC17.97■□□□□ 0.47
CPNE1Q99829 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CPNE1Q99829 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.97■□□□□ 0.47
CPNE1Q99829 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE1Q99829 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.97■□□□□ 0.47
CPNE1Q99829 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CPNE1Q99829 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CPNE1Q99829 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE1Q99829 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE1Q99829 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE1Q99829 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE1Q99829 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CPNE1Q99829 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE1Q99829 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CPNE1Q99829 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE1Q99829 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE1Q99829 ECEL1P2-202ENST00000465689 757 ntBASIC17.96■□□□□ 0.47
CPNE1Q99829 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.96■□□□□ 0.47
CPNE1Q99829 AC113404.2-201ENST00000507884 177 ntBASIC17.96■□□□□ 0.47
CPNE1Q99829 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CPNE1Q99829 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE1Q99829 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.96■□□□□ 0.47
CPNE1Q99829 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.96■□□□□ 0.47
CPNE1Q99829 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.96■□□□□ 0.47
CPNE1Q99829 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE1Q99829 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE1Q99829 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CPNE1Q99829 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE1Q99829 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE1Q99829 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE1Q99829 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE1Q99829 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE1Q99829 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CPNE1Q99829 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
CPNE1Q99829 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE1Q99829 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CPNE1Q99829 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE1Q99829 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE1Q99829 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE1Q99829 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE1Q99829 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE1Q99829 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE1Q99829 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE1Q99829 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CPNE1Q99829 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE1Q99829 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE1Q99829 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE1Q99829 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.95■□□□□ 0.46
CPNE1Q99829 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.95■□□□□ 0.46
CPNE1Q99829 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.95■□□□□ 0.46
CPNE1Q99829 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.95■□□□□ 0.46
CPNE1Q99829 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE1Q99829 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.95■□□□□ 0.46
CPNE1Q99829 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.95■□□□□ 0.46
CPNE1Q99829 AC116407.2-201ENST00000613639 860 ntBASIC17.95■□□□□ 0.46
CPNE1Q99829 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE1Q99829 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms