Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC11.95□□□□□ -0.5
LITAFQ99732 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
LITAFQ99732 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 AL513523.2-202ENST00000427283 2040 ntBASIC11.95□□□□□ -0.5
LITAFQ99732 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
LITAFQ99732 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 KIRREL3-AS3-201ENST00000404882 831 ntBASIC11.95□□□□□ -0.5
LITAFQ99732 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
LITAFQ99732 AC016769.1-201ENST00000409132 1010 ntBASIC11.95□□□□□ -0.5
LITAFQ99732 AC006015.1-201ENST00000429970 570 ntBASIC11.95□□□□□ -0.5
LITAFQ99732 PTPA-216ENST00000432651 857 ntTSL 2 BASIC11.95□□□□□ -0.5
LITAFQ99732 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
LITAFQ99732 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
LITAFQ99732 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC11.95□□□□□ -0.5
LITAFQ99732 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC11.95□□□□□ -0.5
LITAFQ99732 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC11.95□□□□□ -0.5
LITAFQ99732 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC11.95□□□□□ -0.5
LITAFQ99732 REXO2-208ENST00000539754 791 ntTSL 2 BASIC11.95□□□□□ -0.5
LITAFQ99732 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 LINC01451-201ENST00000623792 534 ntBASIC11.95□□□□□ -0.5
LITAFQ99732 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC11.95□□□□□ -0.5
LITAFQ99732 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
LITAFQ99732 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
LITAFQ99732 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC11.95□□□□□ -0.5
LITAFQ99732 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LITAFQ99732 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
LITAFQ99732 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
LITAFQ99732 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC11.94□□□□□ -0.5
LITAFQ99732 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC11.94□□□□□ -0.5
LITAFQ99732 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
LITAFQ99732 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
LITAFQ99732 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.94□□□□□ -0.5
LITAFQ99732 REXO1L11P-201ENST00000620964 1927 ntBASIC11.94□□□□□ -0.5
LITAFQ99732 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC11.94□□□□□ -0.5
LITAFQ99732 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC11.94□□□□□ -0.5
LITAFQ99732 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
LITAFQ99732 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
LITAFQ99732 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
LITAFQ99732 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.94□□□□□ -0.5
LITAFQ99732 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC11.94□□□□□ -0.5
LITAFQ99732 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
LITAFQ99732 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
LITAFQ99732 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
LITAFQ99732 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 ELP6-205ENST00000439305 880 ntTSL 2 BASIC11.94□□□□□ -0.5
LITAFQ99732 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC11.94□□□□□ -0.5
LITAFQ99732 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC11.94□□□□□ -0.5
LITAFQ99732 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC11.94□□□□□ -0.5
LITAFQ99732 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC11.94□□□□□ -0.5
LITAFQ99732 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
LITAFQ99732 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
LITAFQ99732 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC11.94□□□□□ -0.5
LITAFQ99732 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
LITAFQ99732 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
LITAFQ99732 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LITAFQ99732 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms